Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 ST13P14-201ENST00000474095 734 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 RPL32P34-201ENST00000486380 400 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 LRRC34P2-201ENST00000514850 553 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AP003385.6-201ENST00000531603 374 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL121576.1-201ENST00000556055 276 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL133153.1-201ENST00000557756 303 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC015917.1-201ENST00000579654 510 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL356055.1-201ENST00000602528 446 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 MIR7112-201ENST00000616126 65 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AC022149.2-201ENST00000621061 203 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 AL133412.1-201ENST00000380194 2992 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 MTCO1P24-201ENST00000515438 1558 ntBASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
UBE3BQ7Z3V4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC006020.1-201ENST00000420179 1854 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 HSPE1P11-201ENST00000339579 310 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.86-201ENST00000363020 111 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.157-201ENST00000363638 102 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-1078P-201ENST00000364522 103 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-39P-201ENST00000384344 107 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 MIR558-201ENST00000384920 94 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-373P-201ENST00000411247 98 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RPS29P31-201ENST00000446147 164 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 CACYBPP2-201ENST00000453625 678 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RNU7-63P-201ENST00000459054 62 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC026427.2-201ENST00000506228 536 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 RN7SKP116-201ENST00000516902 319 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 OR4R3P-201ENST00000525084 838 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 OR8L1P-201ENST00000534005 955 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC135001.1-201ENST00000544546 283 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC037471.2-201ENST00000564941 598 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 MIR4276-201ENST00000584832 70 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AP001429.1-201ENST00000602568 530 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 AC093648.1-201ENST00000623546 606 ntBASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.26□□□□□ -1.73
UBE3BQ7Z3V4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RPL7P26-201ENST00000333817 754 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RNU5E-8P-201ENST00000363502 116 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.367-201ENST00000365544 101 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RNU4-48P-201ENST00000365559 182 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MT-TD-201ENST00000387419 68 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RNU6-1068P-201ENST00000410958 103 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MTCO3P12-201ENST00000416718 547 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MED13P1-201ENST00000428342 171 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RPL36AP53-201ENST00000432891 316 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC016696.1-201ENST00000446949 318 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 ELOCP23-201ENST00000452014 332 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC233702.1-201ENST00000482905 502 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MTND3P22-201ENST00000510932 243 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RNA5SP401-201ENST00000515920 127 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 SNORA74D-201ENST00000516404 141 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 SNORD60.2-201ENST00000516883 86 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 OR5B19P-201ENST00000531766 928 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC005476.1-201ENST00000554427 397 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC007424.1-203ENST00000554613 687 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RPL21P12-201ENST00000559810 515 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC006557.5-201ENST00000603126 811 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 RNA5SP108-201ENST00000605921 117 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC010338.1-201ENST00000621823 717 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AL359697.1-201ENST00000624879 587 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 MTND4P29-201ENST00000503122 1372 ntBASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UBE3BQ7Z3V4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms