Protein–RNA interactions for Protein: Q6UVK1

CSPG4, Chondroitin sulfate proteoglycan 4, humanhuman

Predictions only

Length 2,322 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4Q6UVK1 AC113155.1-201ENST00000511141 769 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 OR6C73P-201ENST00000546432 358 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 MTCO1P40-201ENST00000574371 625 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 FAM106CP-201ENST00000582212 507 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 GAS5-AS1-201ENST00000602767 694 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AP000254.1-201ENST00000609934 520 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 MTND5P9-201ENST00000503854 1755 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 DEFB108F-201ENST00000344638 222 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 Y_RNA.412-201ENST00000384001 104 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 XKRYP1-201ENST00000423438 492 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 RPL27AP8-201ENST00000424277 446 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC096632.1-201ENST00000427395 310 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 XKRYP2-201ENST00000432915 492 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 JTBP1-201ENST00000441314 247 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC016691.1-201ENST00000441321 413 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 PMCHL2-203ENST00000457791 237 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC068338.1-201ENST00000565567 176 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AC022662.1-201ENST00000580252 331 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 AL031775.1-201ENST00000607014 887 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.89□□□□□ -2.27
CSPG4Q6UVK1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 MIR330-201ENST00000362196 94 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 SNORA67.1-201ENST00000364749 141 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 RNU1-148P-201ENST00000384472 162 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC244098.2-201ENST00000422068 99 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 IPO7P1-201ENST00000442031 636 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 LDHBP3-201ENST00000514909 822 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 MIR3973-201ENST00000579824 107 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 MIR5194-201ENST00000582634 120 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC135178.6-201ENST00000605314 398 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC008962.1-201ENST00000605729 304 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 RNU6-17P-201ENST00000384245 107 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 RNU6-18P-201ENST00000384527 107 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 MIR607-201ENST00000385241 96 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 RPL31P63-201ENST00000422565 375 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 SUB1P1-201ENST00000524415 382 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC118942.1-201ENST00000529674 1035 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC019131.2-201ENST00000609071 870 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AL138880.2-201ENST00000616214 239 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AC145207.9-201ENST00000623802 325 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 AP003122.6-201ENST00000623831 495 ntBASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC0.88□□□□□ -2.27
CSPG4Q6UVK1 RNU6-670P-201ENST00000364312 104 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MIR532-201ENST00000385025 91 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MTCYBP35-201ENST00000503630 1137 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AK3P2-201ENST00000507976 429 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AP004607.1-201ENST00000524456 203 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AC103810.9-201ENST00000606688 112 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MIR8087-201ENST00000612745 78 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AC004808.1-201ENST00000627671 721 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MIR338-201ENST00000636369 67 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 RNU6-105P-201ENST00000363909 104 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 SSXP4-201ENST00000451349 245 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 TRBV8-1-201ENST00000481590 279 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 HMGB1P38-201ENST00000490557 577 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MIR3122-201ENST00000577243 73 ntBASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.87□□□□□ -2.27
CSPG4Q6UVK1 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 Y_RNA.167-201ENST00000363735 109 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 RPL30P12-201ENST00000474666 353 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 RPS27AP10-201ENST00000496103 208 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AC083923.1-201ENST00000523708 376 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 EEF1B2P4-201ENST00000551398 348 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AL132857.1-201ENST00000555180 708 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AC079148.1-201ENST00000565944 819 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AC008739.2-201ENST00000597006 317 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AC020658.4-201ENST00000613987 684 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 AC008669.1-201ENST00000565823 2178 ntBASIC0.86□□□□□ -2.27
CSPG4Q6UVK1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms