Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 GLYCAM1-201ENST00000546596 285 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AC090888.2-201ENST00000559765 1144 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL157394.1-201ENST00000562983 1224 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 MIR3200-201ENST00000580767 85 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC011471.1-201ENST00000585766 187 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AC025588.2-201ENST00000604851 466 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AC004805.2-201ENST00000605382 482 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL627309.6-201ENST00000606857 840 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 AL050303.3-201ENST00000613704 284 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.58□□□□□ -2
NIPAL3Q6P499 AL136313.1-201ENST00000624804 202 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 LRRC77P-213ENST00000637727 880 ntBASIC2.58□□□□□ -2
NIPAL3Q6P499 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.58□□□□□ -2
NIPAL3Q6P499 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.58□□□□□ -2
NIPAL3Q6P499 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NIPAL3Q6P499 MTND5P29-201ENST00000458676 1807 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.57□□□□□ -2
NIPAL3Q6P499 RNY4P24-201ENST00000362735 96 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RNU6-1167P-201ENST00000363227 94 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RNU6-851P-201ENST00000384565 107 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SNORA48.2-201ENST00000390926 124 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SNORA26.7-201ENST00000391288 122 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RSL24D1P4-201ENST00000400938 484 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 EEF1A1P41-201ENST00000414667 207 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RPS24P7-201ENST00000416921 246 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RPL22P18-201ENST00000417197 377 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL590639.1-201ENST00000456484 337 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 RPL9P33-201ENST00000484311 566 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SNORA9.3-201ENST00000516383 129 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SNORA74D-201ENST00000516404 141 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 MTCO3P13-201ENST00000577757 781 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 MIR4999-201ENST00000585029 91 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AC078899.3-201ENST00000599065 212 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AC112187.2-201ENST00000604345 283 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AC013244.3-201ENST00000605614 388 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC2.57□□□□□ -2
NIPAL3Q6P499 AL355472.4-201ENST00000610233 626 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AC131902.3-201ENST00000611767 581 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AC090970.3-201ENST00000612566 866 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 AL031667.3-201ENST00000620124 655 ntBASIC2.57□□□□□ -2
NIPAL3Q6P499 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.57□□□□□ -2
NIPAL3Q6P499 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NIPAL3Q6P499 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.57□□□□□ -2
NIPAL3Q6P499 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
NIPAL3Q6P499 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.57□□□□□ -2
NIPAL3Q6P499 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
NIPAL3Q6P499 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.56□□□□□ -2
NIPAL3Q6P499 SNORD113-6-201ENST00000363345 75 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.56□□□□□ -2
NIPAL3Q6P499 RNU2-49P-201ENST00000410666 184 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AL139281.1-201ENST00000422120 335 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 MTND1P28-201ENST00000435623 950 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 Z80107.1-201ENST00000436830 412 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AL513043.1-201ENST00000439124 535 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 OR6C5P-201ENST00000452388 923 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 CECR9-201ENST00000453421 199 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AC126182.1-201ENST00000478134 357 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 RN7SL499P-201ENST00000481141 276 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.56□□□□□ -2
NIPAL3Q6P499 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.56□□□□□ -2
NIPAL3Q6P499 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 HSPE1P20-201ENST00000538133 289 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AL359212.1-201ENST00000556608 614 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC2.56□□□□□ -2
NIPAL3Q6P499 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.56□□□□□ -2
NIPAL3Q6P499 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 OR10AB1P-201ENST00000609613 938 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.56□□□□□ -2
NIPAL3Q6P499 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.56□□□□□ -2
NIPAL3Q6P499 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms