Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 MTND3P24-201ENST00000506306 329 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 CBX3P3-201ENST00000508108 532 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 RNU6-202P-201ENST00000515998 96 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 RNU6-760P-201ENST00000516078 97 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AL161734.1-201ENST00000609720 557 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AL158801.5-201ENST00000623123 465 ntBASIC2.37□□□□□ -2.03
SNAPC4Q5SXM2 AL513185.3-201ENST00000433335 1300 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 RNU6-1339P-201ENST00000363574 91 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 SNRPEP2-201ENST00000397592 279 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 SUMO1P4-201ENST00000429430 302 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 RAB11AP1-201ENST00000442978 646 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AC104108.1-201ENST00000509930 412 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AC012493.3-201ENST00000604494 112 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 AL590396.2-201ENST00000636511 1041 ntBASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.36□□□□□ -2.03
SNAPC4Q5SXM2 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 RNU6-173P-201ENST00000364215 104 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 MIR548J-201ENST00000408833 112 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC096533.1-201ENST00000411645 353 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 RPS20P24-201ENST00000457473 361 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC015724.1-201ENST00000478577 156 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 OR9N1P-202ENST00000494289 481 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 TRAV28-201ENST00000557548 323 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 MTATP6P3-201ENST00000581686 676 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC092608.3-201ENST00000625017 386 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 AC110079.1-202ENST00000635213 138 ntBASIC2.35□□□□□ -2.03
SNAPC4Q5SXM2 ENSAP3-201ENST00000312710 333 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 RNU6-444P-201ENST00000383988 108 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AL356057.2-201ENST00000403318 432 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 MTND1P33-201ENST00000446251 917 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 MED28P6-201ENST00000558776 231 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AC074051.3-201ENST00000570238 358 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 MIR4446-201ENST00000578505 67 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AL136363.1-201ENST00000605349 337 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AC021851.1-201ENST00000608537 1082 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 AP003400.6-201ENST00000624698 740 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 SEC63P2-201ENST00000503863 1939 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SNAPC4Q5SXM2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
SNAPC4Q5SXM2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 Y_RNA.68-201ENST00000362881 102 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 SNORD114-27-201ENST00000363766 70 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MIR493-201ENST00000385254 89 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC079780.1-201ENST00000428259 207 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 CALM1P1-201ENST00000442082 433 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 COX6CP14-201ENST00000469580 174 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MTCO2P9-201ENST00000503214 694 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MTCO1P47-201ENST00000523889 1271 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 FAM106DP-201ENST00000586416 501 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 NUP58P1-201ENST00000502546 1738 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AL596028.1-201ENST00000326971 197 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 RNA5SP393-201ENST00000363423 117 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 RNU6-730P-201ENST00000383954 104 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MIR649-201ENST00000384843 97 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MIR144-201ENST00000384886 86 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 RNA5SP354-201ENST00000391247 136 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 Z85995.1-201ENST00000415547 335 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC005534.2-201ENST00000431047 433 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 FABP5P3-201ENST00000437960 408 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC234775.1-201ENST00000454247 670 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC096571.1-202ENST00000506634 735 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC010625.1-201ENST00000511296 403 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 HIGD1AP6-201ENST00000521833 279 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 ACTR3BP3-201ENST00000565577 979 ntBASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC2.33□□□□□ -2.04
SNAPC4Q5SXM2 AC083806.3-201ENST00000614016 455 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms