Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 AL035407.2-201ENST00000454090 378 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC087879.1-201ENST00000474343 374 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC023790.1-201ENST00000482174 347 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.09□□□□□ -2.23
CACNA1EQ15878 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.09□□□□□ -2.23
CACNA1EQ15878 MIR548Y-201ENST00000582739 110 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.09□□□□□ -2.23
CACNA1EQ15878 MIR4658-201ENST00000584344 65 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC084373.1-201ENST00000603311 235 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 BNIP3P7-201ENST00000605641 516 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 AL138955.1-201ENST00000622881 1040 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.09□□□□□ -2.23
CACNA1EQ15878 AC018630.2-201ENST00000534866 2403 ntBASIC1.09□□□□□ -2.23
CACNA1EQ15878 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
CACNA1EQ15878 RNU6-697P-201ENST00000363348 107 ntBASIC1.09□□□□□ -2.24
CACNA1EQ15878 TRIM60P3Y-201ENST00000432201 673 ntBASIC1.09□□□□□ -2.24
CACNA1EQ15878 RPL31P20-201ENST00000449593 360 ntBASIC1.09□□□□□ -2.24
CACNA1EQ15878 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
CACNA1EQ15878 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 AC114322.1-201ENST00000506771 926 ntBASIC1.09□□□□□ -2.24
CACNA1EQ15878 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 AC112191.3-201ENST00000604371 277 ntBASIC1.09□□□□□ -2.24
CACNA1EQ15878 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.09□□□□□ -2.24
CACNA1EQ15878 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 SNORA67.1-201ENST00000364749 141 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 AC008850.1-201ENST00000427546 362 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 IPO7P1-201ENST00000442031 636 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 TPMTP4-201ENST00000450749 678 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 SNORD116-30-201ENST00000516468 85 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CACNA1EQ15878 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.08□□□□□ -2.24
CACNA1EQ15878 AC009902.3-201ENST00000606235 2172 ntBASIC1.08□□□□□ -2.24
CACNA1EQ15878 MIR17-201ENST00000385012 84 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 HMGB1P49-201ENST00000418882 569 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 MTND2P8-201ENST00000450555 1025 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 MTCYBP35-201ENST00000503630 1137 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 SUB1P1-201ENST00000524415 382 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC023824.2-201ENST00000566185 400 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC108706.1-201ENST00000611053 297 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC025594.3-201ENST00000613068 790 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC015726.3-201ENST00000624501 418 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC111188.2-201ENST00000529697 1387 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 MFSD8-213ENST00000641134 1327 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU6-673P-201ENST00000365084 104 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU6-629P-201ENST00000384061 103 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU6-167P-201ENST00000384292 106 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU6-1072P-201ENST00000384703 107 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU6-443P-201ENST00000384780 107 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNA5SP127-201ENST00000411051 133 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 RNU7-26P-201ENST00000458980 63 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC113398.2-201ENST00000507630 558 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 CBX3P8-201ENST00000532412 525 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC135178.6-201ENST00000605314 398 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC011472.4-201ENST00000615848 491 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AL627230.5-201ENST00000619807 58 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 AC006963.1-201ENST00000624003 1052 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 MIR203B-201ENST00000636080 86 ntBASIC1.07□□□□□ -2.24
CACNA1EQ15878 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CACNA1EQ15878 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.07□□□□□ -2.24
CACNA1EQ15878 AL354685.2-201ENST00000448218 1447 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 RNU6-492P-201ENST00000363035 104 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 RNU6-234P-201ENST00000365229 104 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.06□□□□□ -2.24
CACNA1EQ15878 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.06□□□□□ -2.24
CACNA1EQ15878 RNA5SP233-201ENST00000459153 113 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 AC090096.1-201ENST00000489168 390 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.06□□□□□ -2.24
CACNA1EQ15878 AP004371.1-201ENST00000525240 214 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC1.06□□□□□ -2.24
CACNA1EQ15878 AC107954.1-201ENST00000565906 727 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 AC010615.3-201ENST00000597319 394 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
CACNA1EQ15878 Y_RNA.303-201ENST00000364998 94 ntBASIC1.06□□□□□ -2.24
CACNA1EQ15878 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 132.6 ms