Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC002400.1-201ENST00000569310 726 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.47□□□□□ -2.01
RAB40BQ12829 RPL23AP78-201ENST00000599928 470 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 DPPA3P3-201ENST00000603842 430 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.47□□□□□ -2.01
RAB40BQ12829 FTX_3.1-201ENST00000610451 147 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC007671.2-201ENST00000637344 619 ntBASIC2.47□□□□□ -2.01
RAB40BQ12829 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAB40BQ12829 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.47□□□□□ -2.01
RAB40BQ12829 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAB40BQ12829 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAB40BQ12829 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RAB40BQ12829 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.46□□□□□ -2.02
RAB40BQ12829 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC078974.1-201ENST00000411597 223 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 RPL17P12-201ENST00000413391 526 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 RPL7P10-201ENST00000417407 739 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC010099.3-201ENST00000423896 409 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 MTCO2P17-201ENST00000424336 677 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC010153.1-201ENST00000432862 727 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC093156.1-201ENST00000440382 670 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 CYCSP32-201ENST00000440548 321 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC2.46□□□□□ -2.02
RAB40BQ12829 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.46□□□□□ -2.02
RAB40BQ12829 MTCO1P42-201ENST00000457379 726 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC013267.1-201ENST00000458227 267 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.46□□□□□ -2.02
RAB40BQ12829 LINC00888-204ENST00000487386 421 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC083906.5-201ENST00000503722 328 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC009901.1-201ENST00000506703 541 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC114786.4-201ENST00000508771 728 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC114797.1-201ENST00000514003 728 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC091826.1-201ENST00000514065 313 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC116347.2-201ENST00000514912 523 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 MTCO1P47-201ENST00000523889 1271 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC087373.1-201ENST00000524920 491 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.46□□□□□ -2.02
RAB40BQ12829 HMGN2P15-201ENST00000585707 270 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC010620.2-201ENST00000600135 313 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AL356575.1-201ENST00000603008 283 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AL035413.2-201ENST00000604801 525 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.46□□□□□ -2.02
RAB40BQ12829 AC239868.4-201ENST00000608318 671 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC090970.3-201ENST00000612566 866 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AL442067.2-201ENST00000614033 363 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC079395.3-201ENST00000615161 484 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 UCA1.1-201ENST00000620952 75 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AC026422.1-201ENST00000623961 452 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 AP003399.1-201ENST00000637534 361 ntBASIC2.46□□□□□ -2.02
RAB40BQ12829 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RAB40BQ12829 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC2.46□□□□□ -2.02
RAB40BQ12829 Y_RNA.46-201ENST00000362695 102 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 SNORA25.6-201ENST00000364121 118 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 Y_RNA.245-201ENST00000364493 95 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 DEFA7P-201ENST00000382676 285 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 RNU6-193P-201ENST00000410977 107 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.45□□□□□ -2.02
RAB40BQ12829 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 RPS27AP14-201ENST00000422868 454 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.45□□□□□ -2.02
RAB40BQ12829 RPS20P5-201ENST00000434808 360 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 WASF1P1-201ENST00000447560 1131 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.45□□□□□ -2.02
RAB40BQ12829 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.45□□□□□ -2.02
RAB40BQ12829 RPS3AP43-201ENST00000479743 781 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.45□□□□□ -2.02
RAB40BQ12829 SUMO2P6-201ENST00000505273 288 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AC026427.2-201ENST00000506228 536 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 SCGB1D5P-201ENST00000515134 247 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.45□□□□□ -2.02
RAB40BQ12829 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RAB40BQ12829 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
RAB40BQ12829 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.45□□□□□ -2.02
RAB40BQ12829 AL356432.3-201ENST00000568952 465 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 MIR4293-201ENST00000584305 78 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.45□□□□□ -2.02
RAB40BQ12829 MTND4LP5-201ENST00000605152 292 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 AC245517.5-201ENST00000611529 162 ntBASIC2.45□□□□□ -2.02
RAB40BQ12829 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.45□□□□□ -2.02
RAB40BQ12829 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.45□□□□□ -2.02
RAB40BQ12829 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RAB40BQ12829 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.44□□□□□ -2.02
RAB40BQ12829 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.44□□□□□ -2.02
RAB40BQ12829 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 357.4 ms