Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.31□□□□□ -2.2
LSM3P62310 BX248123.2-201ENST00000606318 124 ntBASIC1.31□□□□□ -2.2
LSM3P62310 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.31□□□□□ -2.2
LSM3P62310 AC104763.3-201ENST00000613765 618 ntBASIC1.31□□□□□ -2.2
LSM3P62310 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.31□□□□□ -2.2
LSM3P62310 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
LSM3P62310 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.31□□□□□ -2.2
LSM3P62310 RNU6-1159P-201ENST00000362933 107 ntBASIC1.3□□□□□ -2.2
LSM3P62310 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC1.3□□□□□ -2.2
LSM3P62310 RNU6-217P-201ENST00000384164 104 ntBASIC1.3□□□□□ -2.2
LSM3P62310 RNU6-19P-201ENST00000384718 107 ntBASIC1.3□□□□□ -2.2
LSM3P62310 MIR1323-201ENST00000408090 73 ntBASIC1.3□□□□□ -2.2
LSM3P62310 RNU6-77P-201ENST00000410554 91 ntBASIC1.3□□□□□ -2.2
LSM3P62310 EDDM3CP-201ENST00000415977 425 ntBASIC1.3□□□□□ -2.2
LSM3P62310 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AL009174.1-201ENST00000426577 416 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC1.3□□□□□ -2.2
LSM3P62310 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.3□□□□□ -2.2
LSM3P62310 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.3□□□□□ -2.2
LSM3P62310 ELOCP3-201ENST00000439303 348 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
LSM3P62310 CDC42P1-201ENST00000456658 548 ntBASIC1.3□□□□□ -2.2
LSM3P62310 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AC021146.2-201ENST00000504736 556 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
LSM3P62310 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC1.3□□□□□ -2.2
LSM3P62310 HSBP1P1-201ENST00000555205 166 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 AC074050.1-201ENST00000563247 211 ntBASIC1.3□□□□□ -2.2
LSM3P62310 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC1.3□□□□□ -2.2
LSM3P62310 AC106782.4-201ENST00000568264 210 ntBASIC1.3□□□□□ -2.2
LSM3P62310 MIR3162-201ENST00000581818 82 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC1.3□□□□□ -2.2
LSM3P62310 NRBF2P1-201ENST00000587407 859 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AL031176.1-201ENST00000604554 466 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AC080013.4-201ENST00000607624 649 ntBASIC1.3□□□□□ -2.2
LSM3P62310 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
LSM3P62310 AC091304.6-201ENST00000619761 202 ntBASIC1.3□□□□□ -2.2
LSM3P62310 AC011330.2-201ENST00000621680 635 ntBASIC1.3□□□□□ -2.2
LSM3P62310 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.3□□□□□ -2.2
LSM3P62310 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.3□□□□□ -2.2
LSM3P62310 MTCO1P18-201ENST00000455518 1419 ntBASIC1.3□□□□□ -2.2
LSM3P62310 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
LSM3P62310 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LSM3P62310 RNU6-1083P-201ENST00000384022 107 ntBASIC1.29□□□□□ -2.2
LSM3P62310 RNU6-748P-201ENST00000384648 107 ntBASIC1.29□□□□□ -2.2
LSM3P62310 RNA5SP425-201ENST00000410336 112 ntBASIC1.29□□□□□ -2.2
LSM3P62310 RNA5SP450-201ENST00000411206 102 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC007098.1-201ENST00000420122 367 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AL139415.2-201ENST00000431968 163 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.29□□□□□ -2.2
LSM3P62310 AL357134.1-201ENST00000445848 426 ntBASIC1.29□□□□□ -2.2
LSM3P62310 RPL12P25-201ENST00000455592 494 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.29□□□□□ -2.2
LSM3P62310 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
LSM3P62310 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM3P62310 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM3P62310 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
LSM3P62310 AP003066.2-201ENST00000529375 555 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC124947.2-202ENST00000552735 133 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM3P62310 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.29□□□□□ -2.2
LSM3P62310 AC233702.2-202ENST00000562547 291 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.29□□□□□ -2.2
LSM3P62310 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.29□□□□□ -2.2
LSM3P62310 VN1R88P-201ENST00000596787 292 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AL160281.1-201ENST00000605307 311 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC126118.1-201ENST00000607744 628 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC093673.2-201ENST00000609674 331 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC103710.2-201ENST00000609912 942 ntBASIC1.29□□□□□ -2.2
LSM3P62310 AC010678.1-201ENST00000614118 713 ntBASIC1.29□□□□□ -2.2
LSM3P62310 PISRT1-201ENST00000626175 531 ntBASIC1.29□□□□□ -2.2
LSM3P62310 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
LSM3P62310 MTCO1P23-201ENST00000415223 1526 ntBASIC1.29□□□□□ -2.2
LSM3P62310 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
LSM3P62310 U3.13-201ENST00000364804 214 ntBASIC1.28□□□□□ -2.2
LSM3P62310 SNORA27.3-201ENST00000364937 134 ntBASIC1.28□□□□□ -2.2
LSM3P62310 TAF9BP2-201ENST00000400856 499 ntBASIC1.28□□□□□ -2.2
LSM3P62310 USP9YP6-201ENST00000413550 854 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AC092047.1-201ENST00000424997 240 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AL590383.1-201ENST00000428602 75 ntBASIC1.28□□□□□ -2.2
LSM3P62310 MICF-203ENST00000432679 129 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AC016691.1-201ENST00000441321 413 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AMD1P1-201ENST00000457220 922 ntBASIC1.28□□□□□ -2.2
LSM3P62310 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM3P62310 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.28□□□□□ -2.2
LSM3P62310 RNU6-250P-201ENST00000516958 103 ntBASIC1.28□□□□□ -2.2
LSM3P62310 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC1.28□□□□□ -2.2
LSM3P62310 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.28□□□□□ -2.2
LSM3P62310 AC107953.1-201ENST00000522216 297 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AK6P1-201ENST00000540219 478 ntBASIC1.28□□□□□ -2.2
LSM3P62310 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.28□□□□□ -2.2
LSM3P62310 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 147.5 ms