Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
ACTBP60709 RN7SL636P-201ENST00000497504 294 ntBASIC1.89□□□□□ -2.11
ACTBP60709 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTBP60709 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.89□□□□□ -2.11
ACTBP60709 snoZ278.1-201ENST00000517059 112 ntBASIC1.89□□□□□ -2.11
ACTBP60709 RNU2-19P-201ENST00000517288 84 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTBP60709 AC118273.2-201ENST00000532092 465 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.89□□□□□ -2.11
ACTBP60709 AL133241.1-201ENST00000556832 487 ntBASIC1.89□□□□□ -2.11
ACTBP60709 CYCSP2-201ENST00000558168 301 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.89□□□□□ -2.11
ACTBP60709 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
ACTBP60709 MIR4637-201ENST00000582405 84 ntBASIC1.89□□□□□ -2.11
ACTBP60709 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.89□□□□□ -2.11
ACTBP60709 AC098483.2-201ENST00000603158 454 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AL035411.2-201ENST00000604022 421 ntBASIC1.89□□□□□ -2.11
ACTBP60709 MIR6132-201ENST00000622083 109 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AC025048.6-202ENST00000627667 438 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.89□□□□□ -2.11
ACTBP60709 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
ACTBP60709 AL354685.2-201ENST00000448218 1447 ntBASIC1.89□□□□□ -2.11
ACTBP60709 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
ACTBP60709 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ACTBP60709 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
ACTBP60709 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ACTBP60709 OR4G2P-202ENST00000641004 1759 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC1.88□□□□□ -2.11
ACTBP60709 AC103710.2-202ENST00000641454 2853 ntBASIC1.88□□□□□ -2.11
ACTBP60709 RNU6-216P-201ENST00000363282 104 ntBASIC1.88□□□□□ -2.11
ACTBP60709 RNA5SP138-201ENST00000365098 114 ntBASIC1.88□□□□□ -2.11
ACTBP60709 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ACTBP60709 PTGES3P2-201ENST00000407942 482 ntBASIC1.88□□□□□ -2.11
ACTBP60709 RNA5SP508-201ENST00000411327 119 ntBASIC1.88□□□□□ -2.11
ACTBP60709 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
ACTBP60709 ZNF863P-201ENST00000426746 417 ntBASIC1.88□□□□□ -2.11
ACTBP60709 MOB1AP2-201ENST00000446060 614 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC1.88□□□□□ -2.11
ACTBP60709 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
ACTBP60709 OFD1P3Y-201ENST00000453312 783 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AL049874.1-201ENST00000489560 388 ntBASIC1.88□□□□□ -2.11
ACTBP60709 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.88□□□□□ -2.11
ACTBP60709 AC008413.1-201ENST00000511864 177 ntBASIC1.88□□□□□ -2.11
ACTBP60709 RN7SKP31-201ENST00000516354 278 ntBASIC1.88□□□□□ -2.11
ACTBP60709 RNU6-528P-201ENST00000516926 100 ntBASIC1.88□□□□□ -2.11
ACTBP60709 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.88□□□□□ -2.11
ACTBP60709 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.88□□□□□ -2.11
ACTBP60709 AC009097.3-201ENST00000563557 1018 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.88□□□□□ -2.11
ACTBP60709 AP001429.1-201ENST00000602568 530 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AL021997.1-201ENST00000605757 193 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC004067.1-201ENST00000608733 700 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC107294.1-201ENST00000609524 467 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC046143.2-201ENST00000609789 160 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC010678.1-201ENST00000614118 713 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC005296.1-201ENST00000616145 209 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC025034.2-201ENST00000623264 286 ntBASIC1.88□□□□□ -2.11
ACTBP60709 AC093591.3-201ENST00000634516 308 ntBASIC1.88□□□□□ -2.11
ACTBP60709 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.88□□□□□ -2.11
ACTBP60709 RNU4-82P-201ENST00000362443 140 ntBASIC1.87□□□□□ -2.11
ACTBP60709 Y_RNA.25-201ENST00000362528 102 ntBASIC1.87□□□□□ -2.11
ACTBP60709 RNU5B-1-201ENST00000363286 116 ntBASIC1.87□□□□□ -2.11
ACTBP60709 RNU6-707P-201ENST00000364647 95 ntBASIC1.87□□□□□ -2.11
ACTBP60709 SNORA67.4-201ENST00000384688 142 ntBASIC1.87□□□□□ -2.11
ACTBP60709 RNU2-40P-201ENST00000410833 196 ntBASIC1.87□□□□□ -2.11
ACTBP60709 HMGB1P11-201ENST00000413899 637 ntBASIC1.87□□□□□ -2.11
ACTBP60709 MTATP6P27-201ENST00000416987 621 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC009963.1-201ENST00000417265 157 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC005005.2-201ENST00000420779 380 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC092634.2-201ENST00000428146 1010 ntBASIC1.87□□□□□ -2.11
ACTBP60709 MTCYBP45-201ENST00000435243 565 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.87□□□□□ -2.11
ACTBP60709 BTBD7P2-201ENST00000441962 620 ntBASIC1.87□□□□□ -2.11
ACTBP60709 MTND5P30-201ENST00000452896 1731 ntBASIC1.87□□□□□ -2.11
ACTBP60709 RPL26P9-201ENST00000457466 433 ntBASIC1.87□□□□□ -2.11
ACTBP60709 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTBP60709 RPL23AP49-201ENST00000492925 468 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC026414.1-201ENST00000504046 698 ntBASIC1.87□□□□□ -2.11
ACTBP60709 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTBP60709 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTBP60709 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
ACTBP60709 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTBP60709 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC1.87□□□□□ -2.11
ACTBP60709 MTCYBP20-201ENST00000524239 1129 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC1.87□□□□□ -2.11
ACTBP60709 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.87□□□□□ -2.11
ACTBP60709 AC122134.1-202ENST00000569111 1201 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC138915.2-201ENST00000569776 97 ntBASIC1.87□□□□□ -2.11
ACTBP60709 LRRC37A5P-203ENST00000580181 585 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.87□□□□□ -2.11
ACTBP60709 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC005034.5-201ENST00000604219 466 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC069294.1-201ENST00000608397 350 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AP005229.2-201ENST00000609980 697 ntBASIC1.87□□□□□ -2.11
ACTBP60709 U4atac.1-201ENST00000618345 95 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC084824.4-201ENST00000620106 731 ntBASIC1.87□□□□□ -2.11
ACTBP60709 AC098657.3-201ENST00000620434 263 ntBASIC1.87□□□□□ -2.11
ACTBP60709 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.87□□□□□ -2.11
ACTBP60709 AC243829.7-201ENST00000633081 225 ntBASIC1.87□□□□□ -2.11
ACTBP60709 MIR1322-201ENST00000638013 71 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms