Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC073343.1-201ENST00000328239 651 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU6-179P-201ENST00000363350 107 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SNORA70.2-201ENST00000364506 135 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.301-201ENST00000364990 103 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SNORD115-7-201ENST00000365306 82 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU6-61P-201ENST00000365528 109 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU6-637P-201ENST00000384050 107 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.431-201ENST00000384086 102 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SNORA70F-201ENST00000384142 135 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU6-432P-201ENST00000384196 109 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SNORA24.1-201ENST00000384401 135 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AL356967.1-201ENST00000406305 431 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 MIR1251-201ENST00000408552 70 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC017079.2-201ENST00000416102 485 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 PSMA2P3-201ENST00000429685 675 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 KCTD9P3-201ENST00000434597 1169 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 HMGB3P11-201ENST00000440127 604 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 PRPS1P1-201ENST00000445305 876 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RN7SL271P-201ENST00000487601 295 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RPS15AP36-201ENST00000492022 382 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU2-58P-201ENST00000516403 183 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RNU4-60P-201ENST00000517239 135 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AP001804.3-201ENST00000525146 880 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 PARP1P2-201ENST00000556806 195 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RPL23AP87-202ENST00000573039 466 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AL354984.3-201ENST00000604803 325 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AC025034.2-201ENST00000623264 286 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 MTND4P14-201ENST00000435799 1354 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 LARP1BP1-201ENST00000506036 1359 ntBASIC3.11□□□□□ -1.91
ERVFC1-1P60608 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ERVFC1-1P60608 AP001148.1-201ENST00000624124 2359 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.378-201ENST00000365652 113 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 RNU6-356P-201ENST00000384140 107 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 Y_RNA.576-201ENST00000384781 102 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL109755.1-201ENST00000401791 649 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 RN7SKP159-201ENST00000410657 292 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 OR6C66P-201ENST00000414917 930 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 RPL35AP22-201ENST00000436855 335 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC020550.1-201ENST00000447385 163 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 GAPDHP27-201ENST00000447427 1020 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 SNORD19B-201ENST00000459623 84 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC083904.1-201ENST00000487828 231 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 RNU6-1092P-201ENST00000516955 87 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC008011.1-201ENST00000545989 227 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL121576.1-201ENST00000556055 276 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC020661.2-201ENST00000560114 134 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 POLR3GP2-201ENST00000588366 668 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 BNIP3P25-201ENST00000596023 559 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL355812.1-201ENST00000603215 216 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AL356218.2-201ENST00000605264 187 ntBASIC3.1□□□□□ -1.91
ERVFC1-1P60608 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms