Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 RNU6-1303P-201ENST00000364841 107 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
CLRN1P58418 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 Y_RNA.534-201ENST00000384599 112 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 MIR606-201ENST00000384851 96 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 MIR585-201ENST00000384887 94 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 MIR514A1-201ENST00000385133 98 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 LAP3P1-201ENST00000403648 294 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 RNU6-954P-201ENST00000411355 107 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.81□□□□□ -1.8
CLRN1P58418 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 AL590632.1-201ENST00000424289 371 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 RPL23AP52-201ENST00000439311 478 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 HMGB3P22-202ENST00000451823 572 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 RPL30P15-201ENST00000457129 321 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 RPL23AP24-201ENST00000458203 385 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 snoU13.24-201ENST00000458998 104 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 Y_RNA.653-201ENST00000459091 95 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 RN7SL738P-201ENST00000470264 297 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC090096.1-201ENST00000489168 390 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 AC079140.5-201ENST00000507882 310 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 RNU6-1045P-201ENST00000516321 107 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 CDH12P4-201ENST00000517835 295 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 CDH12P3-201ENST00000517935 295 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 IGKV2D-23-201ENST00000518179 286 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 CDH12P1-201ENST00000518435 295 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 CYCSP27-201ENST00000527643 293 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 SNRPGP16-201ENST00000533275 226 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.81□□□□□ -1.8
CLRN1P58418 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.81□□□□□ -1.8
CLRN1P58418 CYP4A43P-201ENST00000568156 121 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC006270.2-201ENST00000578523 652 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC3.81□□□□□ -1.8
CLRN1P58418 AC234771.5-201ENST00000600161 514 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AL162730.1-201ENST00000605734 292 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC040896.1-201ENST00000613819 479 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 AL360181.4-201ENST00000621752 134 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 AP000346.3-201ENST00000622821 210 ntBASIC3.81□□□□□ -1.8
CLRN1P58418 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.81□□□□□ -1.8
CLRN1P58418 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLRN1P58418 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLRN1P58418 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 DEFB108F-201ENST00000344638 222 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 RNU6-128P-201ENST00000383976 107 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 MIR1179-201ENST00000408703 91 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC245054.2-201ENST00000415639 319 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 RPL7P37-201ENST00000425095 738 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 RPL7P28-201ENST00000437739 740 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC3.8□□□□□ -1.8
CLRN1P58418 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 NDUFS5P3-201ENST00000450668 321 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 RPS24P6-201ENST00000452670 400 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 FGF7P3-201ENST00000454645 303 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 RPL23AP81-201ENST00000455252 467 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 MTCO3P10-201ENST00000455912 772 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 RPS29P19-201ENST00000479709 171 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC083829.1-201ENST00000503756 657 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC006499.6-201ENST00000511169 607 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 RNA5SP471-201ENST00000516971 106 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 Y_RNA.711-201ENST00000516993 102 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC012182.1-201ENST00000570133 895 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.8□□□□□ -1.8
CLRN1P58418 MIR5692A1-201ENST00000580523 69 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.8□□□□□ -1.8
CLRN1P58418 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLRN1P58418 AC073539.2-201ENST00000597113 165 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC002044.1-201ENST00000606707 158 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.8□□□□□ -1.8
CLRN1P58418 MIR6128-201ENST00000615528 109 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AL158196.1-201ENST00000616786 434 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC010378.1-201ENST00000619270 362 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 AC067931.1-201ENST00000624190 671 ntBASIC3.8□□□□□ -1.8
CLRN1P58418 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLRN1P58418 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms