Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
HMGCS2P54868 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.88□□□□□ -1.95
HMGCS2P54868 CUL1P1-201ENST00000509510 2425 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 FAT1P1-201ENST00000406588 507 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MIR320C1-201ENST00000408566 88 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS2P54868 RN7SKP223-201ENST00000410582 62 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 AC090960.1-201ENST00000421072 306 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 BX276092.3-201ENST00000424182 230 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS2P54868 RPL7P46-201ENST00000425129 740 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MTATP6P4-201ENST00000427725 675 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AL390023.1-201ENST00000428836 262 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 UBE2D3P4-201ENST00000441973 436 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 MRPL50P4-201ENST00000446432 475 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 EPS15P1-201ENST00000448836 336 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 Z82190.1-201ENST00000454534 490 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AC103975.1-201ENST00000482506 483 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 FAM172BP-201ENST00000487497 1089 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 RNU6-1095P-201ENST00000516148 108 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.88□□□□□ -1.95
HMGCS2P54868 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 AC012435.1-202ENST00000568772 240 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MTCO3P24-201ENST00000572729 782 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 ROCK1P1-201ENST00000573767 549 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AC090615.1-201ENST00000577519 154 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 FAM60BP-201ENST00000578364 658 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC2.88□□□□□ -1.95
HMGCS2P54868 AC110760.3-201ENST00000598794 467 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AP000403.1-201ENST00000603349 851 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 AC103710.4-201ENST00000609301 899 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 MIR7844-201ENST00000616161 122 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
HMGCS2P54868 AL356585.4-201ENST00000623078 1229 ntBASIC2.88□□□□□ -1.95
HMGCS2P54868 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGCS2P54868 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
HMGCS2P54868 OR56A5-201ENST00000340110 738 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 Y_RNA.97-201ENST00000363094 102 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS2P54868 RNU6-769P-201ENST00000384407 104 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 MIR504-201ENST00000385065 83 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 TPMTP3-201ENST00000411928 735 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGCS2P54868 RPS15AP38-201ENST00000413110 372 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 HMGB1P11-201ENST00000413899 637 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 HSPE1P1-201ENST00000421494 318 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 BX119904.4-201ENST00000424402 301 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 DPPA2P1-201ENST00000428060 556 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AL512286.1-201ENST00000439244 400 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGCS2P54868 FAM103A2P-201ENST00000444122 354 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 Z83846.1-201ENST00000446798 265 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS2P54868 AC104563.1-201ENST00000476147 376 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC109486.1-201ENST00000486833 374 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC093534.1-201ENST00000504977 132 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 POU5F1P7-201ENST00000508759 541 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 SNORA31.1-201ENST00000515993 133 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 SNORA31.5-201ENST00000516190 133 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS2P54868 AP003497.1-201ENST00000528472 562 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AP004247.1-201ENST00000531556 1289 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGCS2P54868 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.87□□□□□ -1.95
HMGCS2P54868 AC009063.1-201ENST00000563342 702 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.87□□□□□ -1.95
HMGCS2P54868 AP001004.1-201ENST00000582468 324 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.87□□□□□ -1.95
HMGCS2P54868 MIR6076-201ENST00000617521 113 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC091965.5-201ENST00000624785 342 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC006927.3-201ENST00000638789 384 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AC092447.10-201ENST00000620607 1652 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
HMGCS2P54868 AC012321.1-201ENST00000561622 1588 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AL445523.1-201ENST00000451184 1362 ntBASIC2.87□□□□□ -1.95
HMGCS2P54868 AL161781.1-201ENST00000354277 403 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
HMGCS2P54868 SNORD116-2-201ENST00000384274 95 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 RNU6-1207P-201ENST00000384343 107 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 SNORD116-6-201ENST00000384711 96 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 MIR181B1-201ENST00000385240 110 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 AL021407.1-201ENST00000404531 386 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 MIR1305-201ENST00000408300 86 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AL135786.1-201ENST00000415892 214 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 Z99497.1-201ENST00000421282 135 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGCS2P54868 AL353705.4-201ENST00000449661 238 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 ZNF114P1-201ENST00000453500 292 ntBASIC2.86□□□□□ -1.95
HMGCS2P54868 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.86□□□□□ -1.95
HMGCS2P54868 RNA5SP310-201ENST00000459084 116 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms