Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.06□□□□□ -1.6
RNF144AP50876 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RNF144AP50876 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 SAGE2P-201ENST00000420011 2126 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF144AP50876 RNA5SP46-201ENST00000362370 120 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 Y_RNA.400-201ENST00000383963 111 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RNU6-146P-201ENST00000384602 108 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 SNORD12B-201ENST00000410433 91 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RNU5E-9P-201ENST00000411164 104 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF144AP50876 AC007161.1-204ENST00000423039 460 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 MTATP6P4-201ENST00000427725 675 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 CYCSP6-201ENST00000434498 302 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC073465.2-201ENST00000440938 498 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC009296.1-201ENST00000443146 155 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.05□□□□□ -1.6
RNF144AP50876 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 SNORD2.1-201ENST00000458762 69 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RPL21P13-201ENST00000488305 481 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF144AP50876 RNU6-941P-201ENST00000516346 108 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RN7SKP234-201ENST00000517173 224 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RNF144AP50876 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 MIR4505-201ENST00000582238 73 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 MIR4512-201ENST00000583257 77 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF144AP50876 AC010928.2-201ENST00000588017 287 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC008749.1-201ENST00000597650 306 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RPL7P50-201ENST00000600588 727 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 RPL23AP88-201ENST00000605759 454 ntBASIC5.05□□□□□ -1.6
RNF144AP50876 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF144AP50876 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.05□□□□□ -1.6
RNF144AP50876 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.05□□□□□ -1.6
RNF144AP50876 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RNF144AP50876 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.05□□□□□ -1.6
RNF144AP50876 FAM91A3P-201ENST00000456826 2544 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF144AP50876 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF144AP50876 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 U3.7-201ENST00000363668 216 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 RNA5SP435-201ENST00000364044 108 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
RNF144AP50876 RNU6-17P-201ENST00000384245 107 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 RNU6-18P-201ENST00000384527 107 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 SNORA46.1-201ENST00000391069 153 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 Y_RNA.586-201ENST00000391146 98 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC119751.6-201ENST00000416712 186 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC024067.1-201ENST00000426199 223 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF144AP50876 HSPE1P6-201ENST00000479457 291 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AL160314.1-201ENST00000490836 438 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF144AP50876 AC098976.1-201ENST00000513014 541 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 IGBP1P1-201ENST00000554337 1009 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC022968.1-201ENST00000567372 442 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 AC010547.6-201ENST00000571789 193 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF144AP50876 MIR4716-201ENST00000579628 84 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.04□□□□□ -1.6
RNF144AP50876 AC067852.4-201ENST00000590314 478 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC012616.1-201ENST00000600294 197 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC108738.1-201ENST00000603703 237 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 AC099506.2-201ENST00000623074 221 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 IGHVIII-44-202ENST00000636235 289 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 SMG1P6-201ENST00000532337 2930 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 OR13C1P-202ENST00000641378 2919 ntBASIC5.04□□□□□ -1.6
RNF144AP50876 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RNF144AP50876 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF144AP50876 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC5.04□□□□□ -1.6
RNF144AP50876 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RNF144AP50876 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC5.04□□□□□ -1.6
RNF144AP50876 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RNF144AP50876 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms