Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
PRIM1P49642 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.45□□□□□ -1.38
PRIM1P49642 SAGE2P-201ENST00000420011 2126 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 SNORD113-8-201ENST00000363497 74 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 RNU6-1155P-201ENST00000363554 107 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 RNY4P28-201ENST00000365281 93 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 MIR135A2-201ENST00000384854 100 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 SNORD78.2-201ENST00000391076 69 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 MIR1193-201ENST00000408109 78 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 AC092447.6-201ENST00000414578 210 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC6.44□□□□□ -1.38
PRIM1P49642 RPS29P9-201ENST00000440360 171 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 AC098976.1-201ENST00000513014 541 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 RNU6-496P-201ENST00000516145 99 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 RNU6-62P-201ENST00000516526 102 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 Y_RNA.706-201ENST00000516933 99 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC6.44□□□□□ -1.38
PRIM1P49642 AC138965.3-201ENST00000623875 498 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 AC068724.3-201ENST00000625906 87 ntBASIC6.44□□□□□ -1.38
PRIM1P49642 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
PRIM1P49642 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
PRIM1P49642 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
PRIM1P49642 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
PRIM1P49642 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.43□□□□□ -1.38
PRIM1P49642 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 RNU6-395P-201ENST00000365662 106 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 RNA5SP56-201ENST00000410277 118 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 RN7SKP27-201ENST00000410684 333 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC6.43□□□□□ -1.38
PRIM1P49642 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.43□□□□□ -1.38
PRIM1P49642 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.43□□□□□ -1.38
PRIM1P49642 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.43□□□□□ -1.38
PRIM1P49642 RPS27AP12-201ENST00000429552 465 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.43□□□□□ -1.38
PRIM1P49642 RPL7P47-201ENST00000497299 556 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.43□□□□□ -1.38
PRIM1P49642 ENPP7P9-201ENST00000514456 627 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 HIGD1AP3-201ENST00000515857 278 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC6.43□□□□□ -1.38
PRIM1P49642 MIR7853-201ENST00000584820 132 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 AL162424.1-201ENST00000602325 221 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 AL356218.2-201ENST00000605264 187 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 AC034102.8-201ENST00000615146 484 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 MAPK10-263ENST00000641052 4307 ntBASIC6.43□□□□□ -1.38
PRIM1P49642 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PRIM1P49642 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC6.43□□□□□ -1.38
PRIM1P49642 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
PRIM1P49642 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PRIM1P49642 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 THAP12P5-201ENST00000405864 2275 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PRIM1P49642 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PRIM1P49642 RNU6-989P-201ENST00000362756 107 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 RNU6-326P-201ENST00000365480 107 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 Y_RNA.358-201ENST00000365491 99 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 SNORD63-201ENST00000384262 68 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 Y_RNA.602-201ENST00000410535 92 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 ELOCP19-201ENST00000411919 318 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC6.42□□□□□ -1.38
PRIM1P49642 AC009238.2-201ENST00000431026 355 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 AC087650.1-201ENST00000431445 468 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 MRPL48P1-201ENST00000445390 636 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC6.42□□□□□ -1.38
PRIM1P49642 RNU7-175P-201ENST00000515915 61 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 AC109479.2-201ENST00000517842 174 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC6.42□□□□□ -1.38
PRIM1P49642 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC6.42□□□□□ -1.38
PRIM1P49642 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC6.42□□□□□ -1.38
PRIM1P49642 RPL21P7-201ENST00000557463 483 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 MIR1273C-201ENST00000578669 77 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 AC107294.1-201ENST00000609524 467 ntBASIC6.42□□□□□ -1.38
PRIM1P49642 FTO-223ENST00000640179 210 ntTSL 5 BASIC6.42□□□□□ -1.38
PRIM1P49642 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PRIM1P49642 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
PRIM1P49642 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PRIM1P49642 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.41□□□□□ -1.38
PRIM1P49642 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms