Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC022140.2-201ENST00000623500 188 ntBASIC3.43□□□□□ -1.86
SOX2P48431 AL359697.1-201ENST00000624879 587 ntBASIC3.43□□□□□ -1.86
SOX2P48431 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX2P48431 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX2P48431 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX2P48431 AL353746.1-201ENST00000566293 6881 ntBASIC3.43□□□□□ -1.86
SOX2P48431 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
SOX2P48431 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX2P48431 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.42□□□□□ -1.86
SOX2P48431 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 LARP1BP1-201ENST00000506036 1359 ntBASIC3.42□□□□□ -1.86
SOX2P48431 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
SOX2P48431 RNU6-522P-201ENST00000364497 107 ntBASIC3.42□□□□□ -1.86
SOX2P48431 SNORD6-201ENST00000365444 73 ntBASIC3.42□□□□□ -1.86
SOX2P48431 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 MIR514A1-201ENST00000385133 98 ntBASIC3.42□□□□□ -1.86
SOX2P48431 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SOX2P48431 HLFP1-201ENST00000402375 499 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RNU6-1148P-201ENST00000410992 104 ntBASIC3.42□□□□□ -1.86
SOX2P48431 MTND3P8-201ENST00000412909 339 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC092809.3-201ENST00000415453 231 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RPL21P66-201ENST00000426566 466 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.42□□□□□ -1.86
SOX2P48431 AL591212.2-201ENST00000433923 257 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.42□□□□□ -1.86
SOX2P48431 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.42□□□□□ -1.86
SOX2P48431 PRDX3P3-201ENST00000447765 522 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC104058.1-201ENST00000448028 297 ntBASIC3.42□□□□□ -1.86
SOX2P48431 SCARNA18-201ENST00000459004 134 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RPL23AP62-201ENST00000463396 453 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RN7SL303P-201ENST00000469773 251 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RPL7P19-201ENST00000469948 618 ntBASIC3.42□□□□□ -1.86
SOX2P48431 TRBV12-2-201ENST00000489763 344 ntBASIC3.42□□□□□ -1.86
SOX2P48431 Y_RNA.654-201ENST00000497848 106 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC231760.1-201ENST00000498002 260 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RNU6-927P-201ENST00000516199 100 ntBASIC3.42□□□□□ -1.86
SOX2P48431 SNORA31.8-201ENST00000516327 108 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RNU6-1038P-201ENST00000516516 104 ntBASIC3.42□□□□□ -1.86
SOX2P48431 RNU7-30P-201ENST00000516835 62 ntBASIC3.42□□□□□ -1.86
SOX2P48431 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 AC106782.4-201ENST00000568264 210 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 AC022893.3-201ENST00000607665 437 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AP002826.1-201ENST00000608835 315 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC092807.2-201ENST00000609367 243 ntBASIC3.42□□□□□ -1.86
SOX2P48431 uc_338.5-201ENST00000611839 155 ntBASIC3.42□□□□□ -1.86
SOX2P48431 MIR6798-201ENST00000612887 67 ntBASIC3.42□□□□□ -1.86
SOX2P48431 AC005858.4-201ENST00000623191 700 ntBASIC3.42□□□□□ -1.86
SOX2P48431 OR4G2P-202ENST00000641004 1759 ntBASIC3.42□□□□□ -1.86
SOX2P48431 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 MAPK10-372ENST00000641954 3413 ntBASIC3.42□□□□□ -1.86
SOX2P48431 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.42□□□□□ -1.86
SOX2P48431 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX2P48431 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SOX2P48431 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SOX2P48431 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX2P48431 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX2P48431 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX2P48431 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SOX2P48431 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RNU6-82P-201ENST00000363970 107 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RNA5SP509-201ENST00000364577 119 ntBASIC3.41□□□□□ -1.86
SOX2P48431 SNORA51.2-201ENST00000364595 132 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RNA5SP366-201ENST00000365454 123 ntBASIC3.41□□□□□ -1.86
SOX2P48431 Y_RNA.378-201ENST00000365652 113 ntBASIC3.41□□□□□ -1.86
SOX2P48431 Y_RNA.529-201ENST00000384586 119 ntBASIC3.41□□□□□ -1.86
SOX2P48431 MIR607-201ENST00000385241 96 ntBASIC3.41□□□□□ -1.86
SOX2P48431 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
SOX2P48431 CISD1P1-201ENST00000393907 327 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RPS4XP9-201ENST00000405151 780 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AL356432.1-201ENST00000405809 419 ntBASIC3.41□□□□□ -1.86
SOX2P48431 MIR1290-201ENST00000408735 78 ntBASIC3.41□□□□□ -1.86
SOX2P48431 BX323014.1-201ENST00000412876 237 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC080125.1-201ENST00000414888 684 ntBASIC3.41□□□□□ -1.86
SOX2P48431 TXNP1-201ENST00000441872 371 ntBASIC3.41□□□□□ -1.86
SOX2P48431 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX2P48431 RNU6-1208P-201ENST00000459588 107 ntBASIC3.41□□□□□ -1.86
SOX2P48431 CCDC34P1-201ENST00000507441 517 ntBASIC3.41□□□□□ -1.86
SOX2P48431 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC3.41□□□□□ -1.86
SOX2P48431 AC005921.1-201ENST00000510589 286 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.41□□□□□ -1.86
SOX2P48431 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
SOX2P48431 TTC39CP1-201ENST00000512513 755 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RNU4-49P-201ENST00000516080 140 ntBASIC3.41□□□□□ -1.86
SOX2P48431 RN7SKP256-201ENST00000517201 314 ntBASIC3.41□□□□□ -1.86
SOX2P48431 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX2P48431 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC3.41□□□□□ -1.86
SOX2P48431 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms