Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNU6-489P-201ENST00000618289 107 ntBASIC2.35□□□□□ -2.03
TNFSF9P41273 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.35□□□□□ -2.03
TNFSF9P41273 Z82195.2-201ENST00000612348 18351 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 RNU6-343P-201ENST00000364709 104 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TNFSF9P41273 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 MIR1289-2-201ENST00000408360 111 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 RNU4-26P-201ENST00000410270 107 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFSF9P41273 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFSF9P41273 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFSF9P41273 RPS15AP7-201ENST00000439294 405 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFSF9P41273 ARPC3P5-201ENST00000448802 534 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 RPS20P20-201ENST00000460498 340 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.34□□□□□ -2.03
TNFSF9P41273 AC104090.1-201ENST00000506341 1171 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.34□□□□□ -2.03
TNFSF9P41273 RNY4P37-201ENST00000516225 96 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 COX6CP5-201ENST00000527162 228 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC087241.2-201ENST00000535801 324 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AL132657.2-201ENST00000564417 358 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC005951.2-201ENST00000576282 495 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 BNIP3P31-201ENST00000604515 566 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC103710.4-201ENST00000609301 899 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC245517.5-201ENST00000611529 162 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 UBE2Q2P6-201ENST00000612666 153 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AL357080.1-201ENST00000617394 239 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.34□□□□□ -2.03
TNFSF9P41273 AC093591.3-201ENST00000634516 308 ntBASIC2.34□□□□□ -2.03
TNFSF9P41273 AC104454.1-201ENST00000421341 1401 ntBASIC2.34□□□□□ -2.04
TNFSF9P41273 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF9P41273 VTRNA1-1-201ENST00000363120 99 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 RNU6-97P-201ENST00000363387 104 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 RNU6-637P-201ENST00000384050 107 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 SNORA11.4-201ENST00000408823 129 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFSF9P41273 AL449283.1-202ENST00000418249 604 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFSF9P41273 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.33□□□□□ -2.04
TNFSF9P41273 Z82210.1-201ENST00000440037 231 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 BNIP3P2-201ENST00000441221 577 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 AL118520.1-201ENST00000450770 291 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 AC006499.2-201ENST00000513470 337 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 RNA5SP402-201ENST00000517148 110 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 RNA5SP291-201ENST00000517222 105 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 RANP3-201ENST00000530970 276 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 OR6C7P-201ENST00000547875 934 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 TRAV28-201ENST00000557548 323 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TNFSF9P41273 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.33□□□□□ -2.04
TNFSF9P41273 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.33□□□□□ -2.04
TNFSF9P41273 TMF1P1-201ENST00000576058 373 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 HMGN2P15-201ENST00000585707 270 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 MTND4LP5-201ENST00000605152 292 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TNFSF9P41273 AC010378.1-201ENST00000619270 362 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 AL079343.1-201ENST00000572358 1771 ntBASIC2.33□□□□□ -2.04
TNFSF9P41273 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
TNFSF9P41273 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFSF9P41273 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
TNFSF9P41273 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFSF9P41273 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
TNFSF9P41273 RNU6-741P-201ENST00000383889 107 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 RNU1-39P-201ENST00000383897 165 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 RNU6-298P-201ENST00000390888 96 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AL590084.1-201ENST00000407885 387 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFSF9P41273 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFSF9P41273 AC092047.1-201ENST00000424997 240 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 Z98742.2-201ENST00000431564 187 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 MTATP6P14-201ENST00000455189 673 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 SNORD121B-201ENST00000458838 81 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC097493.1-201ENST00000463958 372 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFSF9P41273 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFSF9P41273 AC005832.3-201ENST00000537929 631 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 YWHAZP1-201ENST00000556286 722 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AL391261.3-201ENST00000557194 520 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC087465.1-201ENST00000560574 245 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 MIR3117-201ENST00000584034 78 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
TNFSF9P41273 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.32□□□□□ -2.04
TNFSF9P41273 AL606834.3-201ENST00000602615 496 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC013562.2-201ENST00000611632 603 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AL445264.1-201ENST00000621719 171 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC009269.6-201ENST00000621778 588 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC104985.3-201ENST00000623479 597 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 MIR4275-201ENST00000636486 87 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.32□□□□□ -2.04
TNFSF9P41273 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.32□□□□□ -2.04
TNFSF9P41273 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 138.3 ms