Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL356057.1-201ENST00000533798 831 ntBASIC3.34□□□□□ -1.87
HADHAP40939 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.34□□□□□ -1.87
HADHAP40939 AC011611.1-201ENST00000552179 197 ntBASIC3.34□□□□□ -1.87
HADHAP40939 TRAV37-201ENST00000553906 342 ntBASIC3.34□□□□□ -1.87
HADHAP40939 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.34□□□□□ -1.87
HADHAP40939 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.34□□□□□ -1.87
HADHAP40939 DUXAP4-201ENST00000603046 613 ntBASIC3.34□□□□□ -1.87
HADHAP40939 OR2AS2P-201ENST00000606902 342 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC107294.1-201ENST00000609524 467 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AC131902.3-201ENST00000611767 581 ntBASIC3.34□□□□□ -1.87
HADHAP40939 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.34□□□□□ -1.87
HADHAP40939 AC093010.3-201ENST00000570269 15214 ntBASIC3.34□□□□□ -1.87
HADHAP40939 AL359693.1-201ENST00000614959 2407 ntBASIC3.34□□□□□ -1.87
HADHAP40939 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.34□□□□□ -1.88
HADHAP40939 FARSBP1-201ENST00000435808 1778 ntBASIC3.33□□□□□ -1.88
HADHAP40939 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HADHAP40939 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HADHAP40939 Z83843.1-201ENST00000604070 3685 ntBASIC3.33□□□□□ -1.88
HADHAP40939 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
HADHAP40939 RNU6-817P-201ENST00000391083 104 ntBASIC3.33□□□□□ -1.88
HADHAP40939 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
HADHAP40939 AL589872.1-201ENST00000426602 288 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AL353705.1-201ENST00000433468 480 ntBASIC3.33□□□□□ -1.88
HADHAP40939 CST9LP2-201ENST00000437612 320 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.33□□□□□ -1.88
HADHAP40939 ST13P20-201ENST00000447996 1065 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC093392.2-201ENST00000450682 337 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC010099.1-201ENST00000455434 375 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AL031183.1-201ENST00000457667 207 ntBASIC3.33□□□□□ -1.88
HADHAP40939 RN7SL807P-201ENST00000470923 297 ntBASIC3.33□□□□□ -1.88
HADHAP40939 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
HADHAP40939 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.33□□□□□ -1.88
HADHAP40939 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.33□□□□□ -1.88
HADHAP40939 RNU7-51P-201ENST00000516560 62 ntBASIC3.33□□□□□ -1.88
HADHAP40939 Y_RNA.695-201ENST00000516715 107 ntBASIC3.33□□□□□ -1.88
HADHAP40939 RNA5SP337-201ENST00000517007 109 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC007458.1-201ENST00000542812 373 ntBASIC3.33□□□□□ -1.88
HADHAP40939 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.33□□□□□ -1.88
HADHAP40939 AC012414.6-201ENST00000568241 401 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.33□□□□□ -1.88
HADHAP40939 MIR4276-201ENST00000584832 70 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.33□□□□□ -1.88
HADHAP40939 AC174048.1-201ENST00000603389 144 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.33□□□□□ -1.88
HADHAP40939 NUTF2P8-201ENST00000604593 363 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AP000860.1-201ENST00000605250 559 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC091304.9-201ENST00000612091 226 ntBASIC3.33□□□□□ -1.88
HADHAP40939 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
HADHAP40939 AC073308.1-201ENST00000623696 305 ntBASIC3.33□□□□□ -1.88
HADHAP40939 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
HADHAP40939 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
HADHAP40939 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HADHAP40939 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HADHAP40939 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.32□□□□□ -1.88
HADHAP40939 AP003122.5-201ENST00000527668 3766 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HADHAP40939 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
HADHAP40939 RNU4-1-201ENST00000363925 141 ntBASIC3.32□□□□□ -1.88
HADHAP40939 RNU6-960P-201ENST00000364056 120 ntBASIC3.32□□□□□ -1.88
HADHAP40939 RNU5E-6P-201ENST00000365574 115 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-9-201ENST00000384000 95 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-2-201ENST00000384274 95 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-3-201ENST00000384287 95 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-7-201ENST00000384404 95 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-5-201ENST00000384462 95 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORD116-6-201ENST00000384711 96 ntBASIC3.32□□□□□ -1.88
HADHAP40939 MIR491-201ENST00000384877 84 ntBASIC3.32□□□□□ -1.88
HADHAP40939 U3.19-201ENST00000390893 196 ntBASIC3.32□□□□□ -1.88
HADHAP40939 SNORA40.3-201ENST00000390964 122 ntBASIC3.32□□□□□ -1.88
HADHAP40939 RPL32P35-201ENST00000415214 394 ntBASIC3.32□□□□□ -1.88
HADHAP40939 ATG3P1-201ENST00000419507 911 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.32□□□□□ -1.88
HADHAP40939 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.32□□□□□ -1.88
HADHAP40939 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.32□□□□□ -1.88
HADHAP40939 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.32□□□□□ -1.88
HADHAP40939 AL136380.1-201ENST00000447970 162 ntBASIC3.32□□□□□ -1.88
HADHAP40939 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.32□□□□□ -1.88
HADHAP40939 RPL21P10-201ENST00000463521 490 ntBASIC3.32□□□□□ -1.88
HADHAP40939 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.32□□□□□ -1.88
HADHAP40939 RNA5SP217-201ENST00000515959 91 ntBASIC3.32□□□□□ -1.88
HADHAP40939 RNU6-1092P-201ENST00000516955 87 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC068657.1-201ENST00000520807 306 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC006504.3-201ENST00000586818 523 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC3.32□□□□□ -1.88
HADHAP40939 AC136601.2-201ENST00000604356 474 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC107294.3-201ENST00000609211 526 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC109347.2-201ENST00000610220 349 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC008250.2-201ENST00000615261 205 ntBASIC3.32□□□□□ -1.88
HADHAP40939 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.32□□□□□ -1.88
HADHAP40939 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
HADHAP40939 AC007998.5-201ENST00000622938 237 ntBASIC3.32□□□□□ -1.88
HADHAP40939 PISRT1-201ENST00000626175 531 ntBASIC3.32□□□□□ -1.88
HADHAP40939 MTND5P29-201ENST00000458676 1807 ntBASIC3.32□□□□□ -1.88
HADHAP40939 AC099654.7-201ENST00000635788 2127 ntBASIC3.32□□□□□ -1.88
HADHAP40939 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.32□□□□□ -1.88
HADHAP40939 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HADHAP40939 RNU6-1167P-201ENST00000363227 94 ntBASIC3.31□□□□□ -1.88
HADHAP40939 RNY1P12-201ENST00000364251 105 ntBASIC3.31□□□□□ -1.88
HADHAP40939 Y_RNA.245-201ENST00000364493 95 ntBASIC3.31□□□□□ -1.88
HADHAP40939 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms