Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 MRPS36P3-201ENST00000519284 130 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
SHMT2P34897 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 HMGB1P14-201ENST00000557424 591 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.48□□□□□ -2.01
SHMT2P34897 AC060771.1-201ENST00000582031 164 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 MIR4672-201ENST00000583126 81 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 AL139344.1-201ENST00000605228 195 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 BCRP9-201ENST00000605312 388 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 MIR6817-201ENST00000615588 66 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AP002782.1-201ENST00000623107 614 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.48□□□□□ -2.01
SHMT2P34897 AC103706.2-201ENST00000638080 240 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 AC026241.1-201ENST00000517873 2142 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 DDX10P1-201ENST00000448545 1933 ntBASIC2.48□□□□□ -2.01
SHMT2P34897 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
SHMT2P34897 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.48□□□□□ -2.01
SHMT2P34897 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHMT2P34897 MTND5P33-201ENST00000571250 1450 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC007785.2-201ENST00000598627 1916 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHMT2P34897 RNA5SP68-201ENST00000363885 119 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 RNU4-28P-201ENST00000364739 141 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 MIR27B-201ENST00000385129 97 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 UBE2V1P2-201ENST00000397758 440 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC080125.1-201ENST00000414888 684 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 Z85995.1-201ENST00000415547 335 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 SPA17P1-201ENST00000416656 452 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AL022400.1-201ENST00000423946 935 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 Z80107.1-201ENST00000436830 412 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 UBE2V1P13-201ENST00000436983 439 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.47□□□□□ -2.01
SHMT2P34897 CBWD4P-201ENST00000445695 655 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AL109741.2-201ENST00000455561 343 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 SRIP1-201ENST00000489235 288 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC135721.1-201ENST00000497954 479 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC104685.1-201ENST00000502445 371 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.47□□□□□ -2.01
SHMT2P34897 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.47□□□□□ -2.01
SHMT2P34897 AC022447.3-201ENST00000506865 495 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 RNU6-928P-201ENST00000516876 104 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 NRON-201ENST00000517270 370 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 RNU6-840P-201ENST00000517275 65 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.47□□□□□ -2.01
SHMT2P34897 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.47□□□□□ -2.01
SHMT2P34897 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.47□□□□□ -2.01
SHMT2P34897 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC2.47□□□□□ -2.01
SHMT2P34897 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.47□□□□□ -2.01
SHMT2P34897 AL354943.1-201ENST00000572103 781 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.47□□□□□ -2.01
SHMT2P34897 AC060766.3-201ENST00000591442 263 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AL031281.1-201ENST00000604049 488 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 NUTF2P8-201ENST00000604593 363 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC026790.2-201ENST00000606282 430 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC097468.3-201ENST00000607956 456 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC072039.2-201ENST00000608883 439 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 TUSC7.1-201ENST00000610969 165 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC104237.2-201ENST00000612456 443 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 TUG1_2.1-201ENST00000614234 87 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 AC013476.2-201ENST00000614456 459 ntBASIC2.47□□□□□ -2.01
SHMT2P34897 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
SHMT2P34897 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHMT2P34897 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.47□□□□□ -2.01
SHMT2P34897 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHMT2P34897 AL049641.1-201ENST00000441055 1948 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 Z82195.2-201ENST00000612348 18351 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AL391994.1-201ENST00000254724 282 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 RNA5SP88-201ENST00000365560 109 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 Y_RNA.500-201ENST00000384466 111 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
SHMT2P34897 MIR1305-201ENST00000408300 86 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 RPS24P7-201ENST00000416921 246 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 AL035407.1-201ENST00000429211 571 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AC236972.1-201ENST00000433225 199 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.46□□□□□ -2.02
SHMT2P34897 BNIP3P2-201ENST00000441221 577 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 BMI1P1-201ENST00000445879 941 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHMT2P34897 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.46□□□□□ -2.02
SHMT2P34897 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 MTND2P24-201ENST00000453434 806 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 RPS3P1-201ENST00000456781 192 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 RNU6-420P-201ENST00000458780 107 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 SNORA59A-201ENST00000459326 152 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 UBE2DNL-203ENST00000474922 222 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC106872.3-201ENST00000495104 446 ntBASIC2.46□□□□□ -2.02
SHMT2P34897 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.46□□□□□ -2.02
SHMT2P34897 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms