Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AL591034.1-201ENST00000407447 340 ntBASIC1.45□□□□□ -2.18
CPS1P31327 AC234064.1-201ENST00000436312 247 ntBASIC1.45□□□□□ -2.18
CPS1P31327 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC1.45□□□□□ -2.18
CPS1P31327 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.45□□□□□ -2.18
CPS1P31327 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.45□□□□□ -2.18
CPS1P31327 AC008749.1-201ENST00000597650 306 ntBASIC1.45□□□□□ -2.18
CPS1P31327 7SK.7-201ENST00000603504 247 ntBASIC1.45□□□□□ -2.18
CPS1P31327 RNU6-716P-201ENST00000365621 103 ntBASIC1.44□□□□□ -2.18
CPS1P31327 MIR513A1-201ENST00000385138 129 ntBASIC1.44□□□□□ -2.18
CPS1P31327 OR51A5P-201ENST00000415429 942 ntBASIC1.44□□□□□ -2.18
CPS1P31327 RNA5SP337-201ENST00000517007 109 ntBASIC1.44□□□□□ -2.18
CPS1P31327 AC245128.3-201ENST00000594721 748 ntBASIC1.44□□□□□ -2.18
CPS1P31327 U73023.1-201ENST00000603134 700 ntBASIC1.44□□□□□ -2.18
CPS1P31327 uc_338.9-201ENST00000617424 182 ntBASIC1.44□□□□□ -2.18
CPS1P31327 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.43□□□□□ -2.18
CPS1P31327 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.43□□□□□ -2.18
CPS1P31327 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.43□□□□□ -2.18
CPS1P31327 GPM6BP3-201ENST00000442797 145 ntBASIC1.43□□□□□ -2.18
CPS1P31327 PSPHP1-201ENST00000450062 261 ntBASIC1.43□□□□□ -2.18
CPS1P31327 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CPS1P31327 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.43□□□□□ -2.18
CPS1P31327 SNORD114-21-201ENST00000606412 72 ntBASIC1.43□□□□□ -2.18
CPS1P31327 AL050343.2-201ENST00000607338 280 ntBASIC1.43□□□□□ -2.18
CPS1P31327 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC1.43□□□□□ -2.18
CPS1P31327 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
CPS1P31327 RNU6-1072P-201ENST00000384703 107 ntBASIC1.42□□□□□ -2.18
CPS1P31327 RNU6-443P-201ENST00000384780 107 ntBASIC1.42□□□□□ -2.18
CPS1P31327 RNU11-5P-201ENST00000391216 129 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.42□□□□□ -2.18
CPS1P31327 AC018630.2-202ENST00000422992 927 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AP000949.1-201ENST00000438328 629 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AC022447.3-201ENST00000506865 495 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AC036111.3-201ENST00000526389 112 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AP004247.1-201ENST00000531556 1289 ntBASIC1.42□□□□□ -2.18
CPS1P31327 MIR8087-201ENST00000612745 78 ntBASIC1.42□□□□□ -2.18
CPS1P31327 AC022079.2-201ENST00000619739 566 ntBASIC1.42□□□□□ -2.18
CPS1P31327 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
CPS1P31327 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.41□□□□□ -2.18
CPS1P31327 HMGB1P49-201ENST00000418882 569 ntBASIC1.41□□□□□ -2.18
CPS1P31327 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.41□□□□□ -2.18
CPS1P31327 RPS27AP10-201ENST00000496103 208 ntBASIC1.41□□□□□ -2.18
CPS1P31327 AC096745.1-201ENST00000509945 370 ntBASIC1.41□□□□□ -2.18
CPS1P31327 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.41□□□□□ -2.18
CPS1P31327 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.41□□□□□ -2.18
CPS1P31327 AC090970.3-201ENST00000612566 866 ntBASIC1.41□□□□□ -2.18
CPS1P31327 AC011472.4-201ENST00000615848 491 ntBASIC1.41□□□□□ -2.18
CPS1P31327 AC091932.3-201ENST00000624223 323 ntBASIC1.41□□□□□ -2.18
CPS1P31327 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
CPS1P31327 AC146507.1-201ENST00000468335 354 ntBASIC1.4□□□□□ -2.18
CPS1P31327 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.4□□□□□ -2.18
CPS1P31327 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC1.4□□□□□ -2.18
CPS1P31327 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.4□□□□□ -2.18
CPS1P31327 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.4□□□□□ -2.19
CPS1P31327 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.4□□□□□ -2.19
CPS1P31327 GDI2P2-201ENST00000445131 608 ntBASIC1.4□□□□□ -2.19
CPS1P31327 AC069277.2-201ENST00000454211 432 ntBASIC1.4□□□□□ -2.19
CPS1P31327 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.4□□□□□ -2.19
CPS1P31327 AL121839.1-201ENST00000556233 1185 ntBASIC1.4□□□□□ -2.19
CPS1P31327 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.19
CPS1P31327 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
CPS1P31327 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.39□□□□□ -2.19
CPS1P31327 ZNF33CP-201ENST00000432492 2030 ntBASIC1.39□□□□□ -2.19
CPS1P31327 MIR936-201ENST00000401264 98 ntBASIC1.39□□□□□ -2.19
CPS1P31327 RNA5SP498-201ENST00000411342 120 ntBASIC1.39□□□□□ -2.19
CPS1P31327 AC092745.2-202ENST00000411880 369 ntBASIC1.39□□□□□ -2.19
CPS1P31327 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.39□□□□□ -2.19
CPS1P31327 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.39□□□□□ -2.19
CPS1P31327 JTBP1-201ENST00000441314 247 ntBASIC1.39□□□□□ -2.19
CPS1P31327 OR6K5P-201ENST00000447050 945 ntBASIC1.39□□□□□ -2.19
CPS1P31327 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
CPS1P31327 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.39□□□□□ -2.19
CPS1P31327 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
CPS1P31327 OR6C73P-201ENST00000546432 358 ntBASIC1.39□□□□□ -2.19
CPS1P31327 MIR4658-201ENST00000584344 65 ntBASIC1.39□□□□□ -2.19
CPS1P31327 AC009220.3-201ENST00000604318 586 ntBASIC1.39□□□□□ -2.19
CPS1P31327 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.39□□□□□ -2.19
CPS1P31327 MTND5P9-201ENST00000503854 1755 ntBASIC1.39□□□□□ -2.19
CPS1P31327 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.38□□□□□ -2.19
CPS1P31327 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
CPS1P31327 DEFB108F-201ENST00000344638 222 ntBASIC1.38□□□□□ -2.19
CPS1P31327 RNU6-670P-201ENST00000364312 104 ntBASIC1.38□□□□□ -2.19
CPS1P31327 MIR17-201ENST00000385012 84 ntBASIC1.38□□□□□ -2.19
CPS1P31327 TRAPPC2P4-201ENST00000421750 331 ntBASIC1.38□□□□□ -2.19
CPS1P31327 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.38□□□□□ -2.19
CPS1P31327 SNRPEP4-201ENST00000435815 279 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AL357134.1-201ENST00000445848 426 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.38□□□□□ -2.19
CPS1P31327 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC1.38□□□□□ -2.19
CPS1P31327 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.38□□□□□ -2.19
CPS1P31327 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.38□□□□□ -2.19
CPS1P31327 AC087465.1-201ENST00000560574 245 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.38□□□□□ -2.19
CPS1P31327 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AC005498.1-201ENST00000592125 465 ntBASIC1.38□□□□□ -2.19
CPS1P31327 NUTF2P8-201ENST00000604593 363 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AC135178.6-201ENST00000605314 398 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AC091925.1-201ENST00000623204 462 ntBASIC1.38□□□□□ -2.19
CPS1P31327 AC004941.2-201ENST00000427009 228 ntBASIC1.37□□□□□ -2.19
CPS1P31327 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.37□□□□□ -2.19
CPS1P31327 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms