Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 AP003355.3-201ENST00000623465 114 ntBASIC4.17□□□□□ -1.74
SMARCA1P28370 AC093648.1-201ENST00000623546 606 ntBASIC4.17□□□□□ -1.74
SMARCA1P28370 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SMARCA1P28370 AC119674.1-207ENST00000641355 633 ntBASIC4.17□□□□□ -1.74
SMARCA1P28370 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.17□□□□□ -1.74
SMARCA1P28370 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SMARCA1P28370 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMARCA1P28370 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC006020.1-201ENST00000420179 1854 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 TNPO1P3-201ENST00000436471 2662 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RNU6-451P-201ENST00000362921 107 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 SNORA72.1-201ENST00000363485 129 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RNU6-188P-201ENST00000364207 107 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RNU4-48P-201ENST00000365559 182 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RNU6-606P-201ENST00000384721 111 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RNU6-1068P-201ENST00000410958 103 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AL136097.1-201ENST00000456945 913 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AC008481.1-201ENST00000463278 396 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AC010631.1-201ENST00000474150 156 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.16□□□□□ -1.74
SMARCA1P28370 RNA5SP401-201ENST00000515920 127 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 SNORA20.3-201ENST00000516880 132 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 SNORA31.22-201ENST00000517204 135 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AP001646.1-201ENST00000527936 915 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.16□□□□□ -1.74
SMARCA1P28370 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC060780.3-201ENST00000589464 80 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.16□□□□□ -1.74
SMARCA1P28370 MIR7851-201ENST00000610611 160 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 RMST_3.1-201ENST00000611651 109 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 SNHG22-203ENST00000617833 660 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 U7.8-201ENST00000619968 63 ntBASIC4.16□□□□□ -1.74
SMARCA1P28370 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMARCA1P28370 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.16□□□□□ -1.74
SMARCA1P28370 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
SMARCA1P28370 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
SMARCA1P28370 AC007823.1-201ENST00000569932 1566 ntBASIC4.15□□□□□ -1.74
SMARCA1P28370 TAB3P1-202ENST00000452645 1634 ntBASIC4.15□□□□□ -1.74
SMARCA1P28370 RNU6-1284P-201ENST00000363701 100 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 RNU6-173P-201ENST00000364215 104 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
SMARCA1P28370 RNU6-876P-201ENST00000391295 104 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 RN7SKP285-201ENST00000410137 318 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 RNU2-39P-201ENST00000410604 198 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 CRYBB2P1-203ENST00000415709 538 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC114491.1-201ENST00000416095 246 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 SNRPEP10-201ENST00000420249 274 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC093106.2-201ENST00000428212 385 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 HMGB1P12-201ENST00000438594 598 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 SEPT14P3-201ENST00000439401 183 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AL732372.2-207ENST00000445840 183 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 SEPT14P2-201ENST00000453405 183 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 RNU7-63P-201ENST00000459054 62 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 RNU6-261P-201ENST00000459506 102 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.15□□□□□ -1.75
SMARCA1P28370 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.15□□□□□ -1.75
SMARCA1P28370 RPS4XP13-201ENST00000483219 789 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.15□□□□□ -1.75
SMARCA1P28370 AC116562.3-201ENST00000506136 177 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 PCBP2P3-201ENST00000509726 843 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC104619.4-201ENST00000510773 249 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.15□□□□□ -1.75
SMARCA1P28370 SEPT14P4-201ENST00000513445 186 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 IGKV2D-19-201ENST00000523346 262 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 FO082796.1-201ENST00000523795 183 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC068587.5-201ENST00000528506 175 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 SNRPGP16-201ENST00000533275 226 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.15□□□□□ -1.75
SMARCA1P28370 AF038458.1-201ENST00000588406 262 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC006116.10-201ENST00000591836 581 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC008739.3-201ENST00000603262 127 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC012443.1-201ENST00000605605 231 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.15□□□□□ -1.75
SMARCA1P28370 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.15□□□□□ -1.75
SMARCA1P28370 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.15□□□□□ -1.75
SMARCA1P28370 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.15□□□□□ -1.75
SMARCA1P28370 RPS4XP5-202ENST00000449995 1334 ntBASIC4.15□□□□□ -1.75
SMARCA1P28370 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SMARCA1P28370 AP001486.2-201ENST00000561652 5113 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.14□□□□□ -1.75
SMARCA1P28370 CEP170P1-201ENST00000502249 4587 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SMARCA1P28370 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC4.14□□□□□ -1.75
SMARCA1P28370 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SMARCA1P28370 RPL7P26-201ENST00000333817 754 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 RNU6-641P-201ENST00000384006 107 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 MIR454-201ENST00000390180 115 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AC110754.1-201ENST00000399740 601 ntBASIC4.14□□□□□ -1.75
SMARCA1P28370 AL359634.1-202ENST00000404721 284 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 133.8 ms