Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.4□□□□□ -1.7
VAMP1P23763 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
VAMP1P23763 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VAMP1P23763 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
VAMP1P23763 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.4□□□□□ -1.7
VAMP1P23763 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
VAMP1P23763 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP1P23763 RNA5SP28-201ENST00000363841 119 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 U8.8-201ENST00000365399 135 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 MIR591-201ENST00000385290 95 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 RNA5SP354-201ENST00000391247 136 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VAMP1P23763 GCNT1P4-201ENST00000404096 329 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 ARL4AP5-201ENST00000404372 599 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.4□□□□□ -1.71
VAMP1P23763 FAR2P2-201ENST00000413041 594 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.4□□□□□ -1.71
VAMP1P23763 AC245291.1-201ENST00000419501 328 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP1P23763 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP1P23763 SETP5-201ENST00000437270 562 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 AL714022.1-201ENST00000439897 151 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.4□□□□□ -1.71
VAMP1P23763 MED28P2-201ENST00000475771 317 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 FO393415.2-201ENST00000480085 343 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 RNU6-470P-201ENST00000515954 104 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 ACA59.2-201ENST00000517061 156 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 AC022634.1-201ENST00000520765 532 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP1P23763 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.4□□□□□ -1.71
VAMP1P23763 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC4.4□□□□□ -1.71
VAMP1P23763 AL355877.2-201ENST00000603670 358 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 AL591034.3-201ENST00000605511 685 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 HMGB1P24-202ENST00000615653 685 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.4□□□□□ -1.71
VAMP1P23763 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
VAMP1P23763 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.4□□□□□ -1.71
VAMP1P23763 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP1P23763 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP1P23763 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.4□□□□□ -1.71
VAMP1P23763 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
VAMP1P23763 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
VAMP1P23763 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP1P23763 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP1P23763 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP1P23763 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP1P23763 RNU6-490P-201ENST00000362985 107 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RNU1-65P-201ENST00000363919 148 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RNU6-596P-201ENST00000365395 98 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 MIR147B-201ENST00000390185 80 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RNU1-101P-201ENST00000391171 127 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AL591034.2-201ENST00000402839 359 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RNA5SP44-201ENST00000410446 133 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.39□□□□□ -1.71
VAMP1P23763 BX276092.3-201ENST00000424182 230 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 PTGES3P4-201ENST00000426243 356 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AL353997.1-201ENST00000432936 108 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RPS3AP46-201ENST00000448352 682 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.39□□□□□ -1.71
VAMP1P23763 AC103987.1-201ENST00000473394 348 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 DEFB109F-201ENST00000491870 277 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 RN7SL447P-201ENST00000494711 245 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP1P23763 RN7SKP46-201ENST00000515942 234 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
VAMP1P23763 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP1P23763 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.39□□□□□ -1.71
VAMP1P23763 VN1R107P-201ENST00000601784 209 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AC005046.1-201ENST00000608515 625 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 AC009541.1-201ENST00000438279 2662 ntBASIC4.39□□□□□ -1.71
VAMP1P23763 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VAMP1P23763 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
VAMP1P23763 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.38□□□□□ -1.71
VAMP1P23763 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VAMP1P23763 AC032011.1-201ENST00000611703 1549 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RN7SKP184-201ENST00000362348 333 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RNU6-942P-201ENST00000363002 107 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 Y_RNA.123-201ENST00000363338 102 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RNU1-140P-201ENST00000365040 165 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 Y_RNA.428-201ENST00000384078 102 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RNU6-474P-201ENST00000384243 107 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
VAMP1P23763 RPS29P13-201ENST00000402041 169 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RNA5SP36-201ENST00000410197 133 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 RN7SKP125-201ENST00000410481 302 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.38□□□□□ -1.71
VAMP1P23763 AL022324.2-201ENST00000434827 780 ntBASIC4.38□□□□□ -1.71
VAMP1P23763 OR6D1P-201ENST00000436165 939 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms