Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
RFX1P22670 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
RFX1P22670 Y_RNA.39-201ENST00000362620 98 ntBASIC5.41□□□□□ -1.54
RFX1P22670 RNA5SP87-201ENST00000384155 118 ntBASIC5.41□□□□□ -1.54
RFX1P22670 Y_RNA.577-201ENST00000384794 101 ntBASIC5.41□□□□□ -1.54
RFX1P22670 MT-TG-201ENST00000387429 68 ntBASIC5.41□□□□□ -1.54
RFX1P22670 RNU6-907P-201ENST00000390924 102 ntBASIC5.41□□□□□ -1.54
RFX1P22670 Y_RNA.618-201ENST00000410949 107 ntBASIC5.41□□□□□ -1.54
RFX1P22670 Y_RNA.623-201ENST00000411128 95 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX1P22670 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX1P22670 AL691482.1-201ENST00000453255 87 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC078918.1-201ENST00000498515 228 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC140172.1-201ENST00000502928 141 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC110794.1-201ENST00000505816 425 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.41□□□□□ -1.54
RFX1P22670 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX1P22670 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.41□□□□□ -1.54
RFX1P22670 MIR4284-201ENST00000578924 81 ntBASIC5.41□□□□□ -1.54
RFX1P22670 MIR3668-201ENST00000582138 75 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.41□□□□□ -1.54
RFX1P22670 AC008745.1-201ENST00000604064 271 ntBASIC5.41□□□□□ -1.54
RFX1P22670 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.41□□□□□ -1.54
RFX1P22670 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX1P22670 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX1P22670 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RFX1P22670 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.41□□□□□ -1.54
RFX1P22670 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RFX1P22670 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RFX1P22670 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX1P22670 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX1P22670 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX1P22670 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
RFX1P22670 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.4□□□□□ -1.54
RFX1P22670 SNORD14B-201ENST00000364533 90 ntBASIC5.4□□□□□ -1.54
RFX1P22670 RNU6-933P-201ENST00000384424 107 ntBASIC5.4□□□□□ -1.54
RFX1P22670 RNU6-823P-201ENST00000391042 103 ntBASIC5.4□□□□□ -1.54
RFX1P22670 RNU6-101P-201ENST00000410323 104 ntBASIC5.4□□□□□ -1.54
RFX1P22670 AC022447.4-201ENST00000504053 364 ntBASIC5.4□□□□□ -1.54
RFX1P22670 Y_RNA.719-201ENST00000517156 106 ntBASIC5.4□□□□□ -1.54
RFX1P22670 AC012339.2-201ENST00000523996 453 ntBASIC5.4□□□□□ -1.54
RFX1P22670 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX1P22670 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.4□□□□□ -1.54
RFX1P22670 MIR6758-201ENST00000620653 63 ntBASIC5.4□□□□□ -1.54
RFX1P22670 AC007792.1-201ENST00000623023 402 ntBASIC5.4□□□□□ -1.54
RFX1P22670 FP236240.3-201ENST00000623061 327 ntBASIC5.4□□□□□ -1.54
RFX1P22670 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX1P22670 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.4□□□□□ -1.54
RFX1P22670 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RFX1P22670 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
RFX1P22670 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RFX1P22670 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX1P22670 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX1P22670 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RFX1P22670 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
RFX1P22670 RNU6-26P-201ENST00000383985 107 ntBASIC5.39□□□□□ -1.55
RFX1P22670 SNORA40C-201ENST00000391285 128 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX1P22670 SNORD56-201ENST00000413522 71 ntBASIC5.39□□□□□ -1.55
RFX1P22670 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX1P22670 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX1P22670 RPS15AP10-201ENST00000432472 382 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AC011753.3-201ENST00000443436 406 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AC073264.2-201ENST00000448886 166 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AL353752.1-201ENST00000454946 260 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AC112492.4-201ENST00000456549 352 ntBASIC5.39□□□□□ -1.55
RFX1P22670 RPL31P13-201ENST00000484151 370 ntBASIC5.39□□□□□ -1.55
RFX1P22670 RN7SL244P-201ENST00000493405 297 ntBASIC5.39□□□□□ -1.55
RFX1P22670 HMGB3P16-201ENST00000508037 287 ntBASIC5.39□□□□□ -1.55
RFX1P22670 OR7H2P-201ENST00000513483 306 ntBASIC5.39□□□□□ -1.55
RFX1P22670 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.39□□□□□ -1.55
RFX1P22670 PARP1P2-201ENST00000556806 195 ntBASIC5.39□□□□□ -1.55
RFX1P22670 TRAV28-201ENST00000557548 323 ntBASIC5.39□□□□□ -1.55
RFX1P22670 ATP5J2P6-201ENST00000565203 266 ntBASIC5.39□□□□□ -1.55
RFX1P22670 MIR4273-201ENST00000582824 84 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AL355598.1-201ENST00000604169 202 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AL138825.1-201ENST00000618587 192 ntBASIC5.39□□□□□ -1.55
RFX1P22670 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC5.39□□□□□ -1.55
RFX1P22670 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RFX1P22670 DHX9P1-201ENST00000436565 3076 ntBASIC5.39□□□□□ -1.55
RFX1P22670 AC066616.2-201ENST00000559334 1481 ntBASIC5.39□□□□□ -1.55
RFX1P22670 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX1P22670 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RFX1P22670 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RFX1P22670 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RFX1P22670 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
RFX1P22670 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.38□□□□□ -1.55
RFX1P22670 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RFX1P22670 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms