Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AL358075.3-201ENST00000426289 226 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGA1P17096 AL513321.1-201ENST00000441175 761 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 GDI2P2-201ENST00000445131 608 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 COX6CP18-201ENST00000448769 222 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 KLF3P2-201ENST00000465138 268 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC055731.1-201ENST00000474387 401 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 RPS27P26-201ENST00000494583 239 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGA1P17096 AP001960.1-201ENST00000506494 658 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC008837.2-201ENST00000513076 418 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGA1P17096 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.07□□□□□ -2.24
HMGA1P17096 FAM106DP-201ENST00000586416 501 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC1.07□□□□□ -2.24
HMGA1P17096 AC115085.1-201ENST00000588924 229 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 VN1R81P-201ENST00000602085 372 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 AC008555.8-201ENST00000623602 2168 ntBASIC1.07□□□□□ -2.24
HMGA1P17096 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HMGA1P17096 MIR373-201ENST00000362273 69 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 RNU4-38P-201ENST00000364472 129 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
HMGA1P17096 RNU6-1032P-201ENST00000384100 107 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 MIR147B-201ENST00000390185 80 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AL512604.1-201ENST00000404812 257 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 HNRNPDP2-201ENST00000406475 478 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.06□□□□□ -2.24
HMGA1P17096 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC1.06□□□□□ -2.24
HMGA1P17096 HSPE1P24-201ENST00000450782 238 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 RNU6-113P-201ENST00000516653 101 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AP005660.1-201ENST00000522972 293 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AP001804.3-201ENST00000525146 880 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 MTCYBP23-201ENST00000558717 1102 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AC090888.1-201ENST00000561335 1141 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.06□□□□□ -2.24
HMGA1P17096 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGA1P17096 AL050343.2-201ENST00000607338 280 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.06□□□□□ -2.24
HMGA1P17096 AC106052.1-201ENST00000608029 497 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 MIR7111-201ENST00000619751 72 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 ZNF37BP-203ENST00000452306 1352 ntBASIC1.06□□□□□ -2.24
HMGA1P17096 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HMGA1P17096 MIR126-201ENST00000362291 85 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 SNORD14B-201ENST00000364533 90 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 RNA5SP465-201ENST00000391195 109 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 HMGN1P14-201ENST00000412459 517 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGA1P17096 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.05□□□□□ -2.24
HMGA1P17096 MTATP6P7-201ENST00000453315 681 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 RPS29P1-201ENST00000465274 159 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 MRPS36P2-201ENST00000512569 299 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 SNORA31.16-201ENST00000516773 139 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGA1P17096 GLYCAM1-201ENST00000546596 285 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.05□□□□□ -2.24
HMGA1P17096 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.05□□□□□ -2.24
HMGA1P17096 RN7SL622P-201ENST00000585292 275 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 AC012254.4-201ENST00000588843 273 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.05□□□□□ -2.24
HMGA1P17096 AL450336.1-201ENST00000605180 586 ntBASIC1.05□□□□□ -2.24
HMGA1P17096 SGO1P2-201ENST00000429458 1589 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 Y_RNA.122-201ENST00000363331 96 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 RNU1-105P-201ENST00000363470 161 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 SNORA62.1-201ENST00000364287 154 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 SNORA68.1-201ENST00000364537 132 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 SNORA18.2-201ENST00000383865 132 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 RNU6-19P-201ENST00000384718 107 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 U3.20-201ENST00000390909 217 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 TXNP7-201ENST00000406296 293 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 MIR1285-1-201ENST00000408593 84 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 MORN2-203ENST00000409131 544 ntTSL 5 BASIC1.04□□□□□ -2.24
HMGA1P17096 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGA1P17096 NUP35P2-201ENST00000416748 943 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AL031663.1-201ENST00000437445 219 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGA1P17096 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGA1P17096 AC010099.1-201ENST00000455434 375 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AC087884.1-201ENST00000469738 328 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGA1P17096 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HMGA1P17096 AL359273.1-201ENST00000510918 627 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGA1P17096 AC068135.2-201ENST00000569293 1028 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.04□□□□□ -2.24
HMGA1P17096 HSPE1P7-201ENST00000604681 321 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AC083806.3-201ENST00000614016 455 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AC025588.4-201ENST00000615802 908 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 AC091304.6-201ENST00000619761 202 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.04□□□□□ -2.24
HMGA1P17096 AC087821.2-201ENST00000637086 450 ntBASIC1.04□□□□□ -2.24
HMGA1P17096 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HMGA1P17096 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HMGA1P17096 DDX10P1-201ENST00000448545 1933 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HMGA1P17096 MIR513A1-201ENST00000385138 129 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 FCF1P2-201ENST00000415284 583 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 EIF4EP4-201ENST00000424916 578 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 AIMP1P2-201ENST00000425294 312 ntBASIC1.03□□□□□ -2.24
HMGA1P17096 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms