Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 AC079587.1-201ENST00000603846 277 ntBASIC4.33□□□□□ -1.72
COL6A2P12110 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL6A2P12110 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL6A2P12110 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL6A2P12110 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 RNU6-371P-201ENST00000364283 108 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 SNORA22B-201ENST00000383876 138 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RNU6-1074P-201ENST00000383995 104 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RNA5SP87-201ENST00000384155 118 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RNU6-601P-201ENST00000384540 107 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RNU6-1304P-201ENST00000411374 106 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RPS12P24-201ENST00000412619 387 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC244098.2-201ENST00000422068 99 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 PMCHL1-202ENST00000423102 261 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.32□□□□□ -1.72
COL6A2P12110 RPL7P28-201ENST00000437739 740 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AL359073.1-201ENST00000448036 403 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 MRPS31P2-201ENST00000451581 518 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 RPL31P60-201ENST00000478450 367 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 CEACAMP10-202ENST00000495431 496 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AC020593.1-201ENST00000507399 299 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 RNU6-840P-201ENST00000517275 65 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.32□□□□□ -1.72
COL6A2P12110 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.32□□□□□ -1.72
COL6A2P12110 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.32□□□□□ -1.72
COL6A2P12110 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC005255.1-201ENST00000593748 216 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 AC133104.2-201ENST00000615272 193 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AL355365.1-201ENST00000616480 294 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AC008121.3-201ENST00000618726 433 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AL731566.2-201ENST00000618971 317 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 AC010378.1-201ENST00000619270 362 ntBASIC4.32□□□□□ -1.72
COL6A2P12110 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
COL6A2P12110 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL6A2P12110 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.32□□□□□ -1.72
COL6A2P12110 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL6A2P12110 AC007823.1-201ENST00000569932 1566 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 SDAD1P2-201ENST00000441308 2028 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 Y_RNA.28-201ENST00000362554 111 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 SNORD113.2-201ENST00000364166 89 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 SNORA70F-201ENST00000384142 135 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 RNU6-328P-201ENST00000390887 106 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 SNORD66.1-201ENST00000391230 76 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AL139039.1-201ENST00000401900 692 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 AL591212.2-201ENST00000433923 257 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.31□□□□□ -1.72
COL6A2P12110 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.31□□□□□ -1.72
COL6A2P12110 PRDX3P3-201ENST00000447765 522 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC010326.1-201ENST00000462726 602 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC117503.1-201ENST00000472241 394 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 VN1R104P-201ENST00000505115 1009 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC017037.1-201ENST00000508460 471 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 TBCAP3-201ENST00000512475 312 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC4.31□□□□□ -1.72
COL6A2P12110 GMPSP1-201ENST00000514075 579 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 SMURF2P1-201ENST00000514992 481 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 AC012182.1-201ENST00000570133 895 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC100830.2-201ENST00000581636 240 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 AC016925.2-201ENST00000605108 242 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 AL713922.2-201ENST00000619384 716 ntBASIC4.31□□□□□ -1.72
COL6A2P12110 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.31□□□□□ -1.72
COL6A2P12110 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.31□□□□□ -1.72
COL6A2P12110 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
COL6A2P12110 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms