Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 RNU6-840P-201ENST00000517275 65 ntBASIC2.26□□□□□ -2.05
TPM1P09493 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.26□□□□□ -2.05
TPM1P09493 EIF4BP1-201ENST00000554881 351 ntBASIC2.26□□□□□ -2.05
TPM1P09493 AC007151.1-201ENST00000572774 483 ntBASIC2.26□□□□□ -2.05
TPM1P09493 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.26□□□□□ -2.05
TPM1P09493 AC025165.5-201ENST00000602802 578 ntBASIC2.26□□□□□ -2.05
TPM1P09493 AC005000.2-201ENST00000605468 310 ntBASIC2.26□□□□□ -2.05
TPM1P09493 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
TPM1P09493 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TPM1P09493 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
TPM1P09493 SNORA46.1-201ENST00000391069 153 ntBASIC2.25□□□□□ -2.05
TPM1P09493 CIR1P3-201ENST00000405137 479 ntBASIC2.25□□□□□ -2.05
TPM1P09493 BTF3P7-201ENST00000407097 488 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC009963.1-201ENST00000417265 157 ntBASIC2.25□□□□□ -2.05
TPM1P09493 MTCO2P5-201ENST00000422621 426 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC016691.1-201ENST00000441321 413 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC126389.1-201ENST00000477436 290 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC004924.1-201ENST00000480160 781 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.25□□□□□ -2.05
TPM1P09493 LTV1P1-201ENST00000510683 1237 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC108043.1-201ENST00000512696 574 ntBASIC2.25□□□□□ -2.05
TPM1P09493 SNRPGP18-201ENST00000553000 214 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AL133241.1-201ENST00000556832 487 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC2.25□□□□□ -2.05
TPM1P09493 AL391813.1-201ENST00000603098 260 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AL390208.1-201ENST00000605885 644 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC2.25□□□□□ -2.05
TPM1P09493 AC010975.3-201ENST00000618727 978 ntBASIC2.25□□□□□ -2.05
TPM1P09493 MIR6873-201ENST00000622788 63 ntBASIC2.25□□□□□ -2.05
TPM1P09493 AP002791.1-201ENST00000623291 381 ntBASIC2.25□□□□□ -2.05
TPM1P09493 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC2.25□□□□□ -2.05
TPM1P09493 AL356473.1-201ENST00000406203 1408 ntBASIC2.25□□□□□ -2.05
TPM1P09493 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
TPM1P09493 RNU6-216P-201ENST00000363282 104 ntBASIC2.24□□□□□ -2.05
TPM1P09493 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
TPM1P09493 RNU1-148P-201ENST00000384472 162 ntBASIC2.24□□□□□ -2.05
TPM1P09493 Y_RNA.548-201ENST00000384656 105 ntBASIC2.24□□□□□ -2.05
TPM1P09493 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
TPM1P09493 AL031679.1-201ENST00000400616 525 ntBASIC2.24□□□□□ -2.05
TPM1P09493 DHFRP6-201ENST00000401776 268 ntBASIC2.24□□□□□ -2.05
TPM1P09493 RNA5SP80-201ENST00000410475 111 ntBASIC2.24□□□□□ -2.05
TPM1P09493 RNA5SP270-201ENST00000411361 118 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AC093106.2-201ENST00000428212 385 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.24□□□□□ -2.05
TPM1P09493 RSL24D1P8-201ENST00000434442 492 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
TPM1P09493 ATG12P2-201ENST00000456830 416 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AC055731.1-201ENST00000474387 401 ntBASIC2.24□□□□□ -2.05
TPM1P09493 snoZ278.1-201ENST00000517059 112 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.24□□□□□ -2.05
TPM1P09493 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.24□□□□□ -2.05
TPM1P09493 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.24□□□□□ -2.05
TPM1P09493 AC026741.1-201ENST00000605892 482 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AC069294.1-201ENST00000608397 350 ntBASIC2.24□□□□□ -2.05
TPM1P09493 AC007998.5-201ENST00000622938 237 ntBASIC2.24□□□□□ -2.05
TPM1P09493 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.24□□□□□ -2.05
TPM1P09493 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
TPM1P09493 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.24□□□□□ -2.05
TPM1P09493 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
TPM1P09493 AC110491.1-201ENST00000562191 2010 ntBASIC2.24□□□□□ -2.05
TPM1P09493 HSPA8P4-201ENST00000511877 1920 ntBASIC2.23□□□□□ -2.05
TPM1P09493 RNU6-28P-201ENST00000362378 107 ntBASIC2.23□□□□□ -2.05
TPM1P09493 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM1P09493 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
TPM1P09493 TPMTP3-201ENST00000411928 735 ntBASIC2.23□□□□□ -2.05
TPM1P09493 USP9YP19-201ENST00000412165 485 ntBASIC2.23□□□□□ -2.05
TPM1P09493 USP9YP13-201ENST00000417797 480 ntBASIC2.23□□□□□ -2.05
TPM1P09493 PTP4A1P7-201ENST00000423476 514 ntBASIC2.23□□□□□ -2.05
TPM1P09493 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
TPM1P09493 ZYG11AP1-201ENST00000430329 837 ntBASIC2.23□□□□□ -2.05
TPM1P09493 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.23□□□□□ -2.05
TPM1P09493 AC098831.1-201ENST00000440661 216 ntBASIC2.23□□□□□ -2.05
TPM1P09493 AL831737.1-201ENST00000441288 271 ntBASIC2.23□□□□□ -2.05
TPM1P09493 AL158053.1-201ENST00000441503 453 ntBASIC2.23□□□□□ -2.05
TPM1P09493 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM1P09493 AC002381.1-201ENST00000447049 280 ntBASIC2.23□□□□□ -2.05
TPM1P09493 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM1P09493 SNORA31.25-201ENST00000517242 134 ntBASIC2.23□□□□□ -2.05
TPM1P09493 FAM92A1P1-201ENST00000528023 890 ntBASIC2.23□□□□□ -2.05
TPM1P09493 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM1P09493 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.23□□□□□ -2.05
TPM1P09493 AC008749.1-201ENST00000597650 306 ntBASIC2.23□□□□□ -2.05
TPM1P09493 AC012493.3-201ENST00000604494 112 ntBASIC2.23□□□□□ -2.05
TPM1P09493 AC253576.2-201ENST00000618815 580 ntBASIC2.23□□□□□ -2.05
TPM1P09493 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM1P09493 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM1P09493 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.23□□□□□ -2.05
TPM1P09493 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
TPM1P09493 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
TPM1P09493 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TPM1P09493 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
TPM1P09493 Y_RNA.333-201ENST00000365274 102 ntBASIC2.22□□□□□ -2.05
TPM1P09493 RNU1-73P-201ENST00000383971 164 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AL139421.1-201ENST00000423010 169 ntBASIC2.22□□□□□ -2.05
TPM1P09493 RPL30P4-201ENST00000429309 333 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AC004383.1-201ENST00000438135 289 ntBASIC2.22□□□□□ -2.05
TPM1P09493 USP9YP8-201ENST00000441913 500 ntBASIC2.22□□□□□ -2.05
TPM1P09493 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.22□□□□□ -2.05
TPM1P09493 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.22□□□□□ -2.05
TPM1P09493 SNORD121B-201ENST00000458838 81 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms