Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ISCA1P1-201ENST00000426679 387 ntBASIC3.58□□□□□ -1.84
MMP3P08254 MTCO2P19-201ENST00000427513 598 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 MRPS10P2-201ENST00000431226 381 ntBASIC3.58□□□□□ -1.84
MMP3P08254 RPS15AP9-201ENST00000439856 381 ntBASIC3.58□□□□□ -1.84
MMP3P08254 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 AC132479.1-201ENST00000449160 144 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 AC092989.1-201ENST00000481235 277 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC096576.1-201ENST00000489014 359 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC109927.2-201ENST00000506416 303 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC009646.1-201ENST00000510455 318 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC105914.1-201ENST00000511798 226 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC010493.1-201ENST00000513479 292 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC008885.1-201ENST00000514930 301 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC026801.2-201ENST00000515352 425 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.58□□□□□ -1.84
MMP3P08254 AP004371.1-201ENST00000525240 214 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.58□□□□□ -1.84
MMP3P08254 DEFB108D-201ENST00000527787 222 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.58□□□□□ -1.84
MMP3P08254 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.58□□□□□ -1.84
MMP3P08254 AL133241.1-201ENST00000556832 487 ntBASIC3.58□□□□□ -1.84
MMP3P08254 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.58□□□□□ -1.84
MMP3P08254 UBL5P2-201ENST00000583788 219 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.58□□□□□ -1.84
MMP3P08254 Z84480.1-201ENST00000605131 311 ntBASIC3.58□□□□□ -1.84
MMP3P08254 HMGB1P50-201ENST00000605814 607 ntBASIC3.58□□□□□ -1.84
MMP3P08254 U4.5-201ENST00000617137 123 ntBASIC3.58□□□□□ -1.84
MMP3P08254 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.58□□□□□ -1.84
MMP3P08254 AL353748.2-201ENST00000622148 471 ntBASIC3.58□□□□□ -1.84
MMP3P08254 AC110801.1-201ENST00000623590 212 ntBASIC3.58□□□□□ -1.84
MMP3P08254 HSPA8P1-201ENST00000425843 1833 ntBASIC3.58□□□□□ -1.84
MMP3P08254 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.58□□□□□ -1.84
MMP3P08254 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MMP3P08254 Y_RNA.159-201ENST00000363674 87 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
MMP3P08254 MIR181A1-201ENST00000385026 110 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP3P08254 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP3P08254 UBE2FP1-201ENST00000416536 447 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AL353193.1-201ENST00000421444 268 ntBASIC3.57□□□□□ -1.84
MMP3P08254 ELOCP14-201ENST00000428070 331 ntBASIC3.57□□□□□ -1.84
MMP3P08254 ELOCP7-201ENST00000439968 331 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC003071.1-201ENST00000451219 789 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC108059.3-201ENST00000456388 214 ntBASIC3.57□□□□□ -1.84
MMP3P08254 RNU7-59P-201ENST00000459101 61 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC092451.1-201ENST00000480211 153 ntBASIC3.57□□□□□ -1.84
MMP3P08254 RPS15AP36-201ENST00000492022 382 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC097462.2-201ENST00000504623 481 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP3P08254 ARL4AP2-201ENST00000507378 601 ntBASIC3.57□□□□□ -1.84
MMP3P08254 SCARNA24.1-201ENST00000516465 137 ntBASIC3.57□□□□□ -1.84
MMP3P08254 RNU6-64P-201ENST00000517119 105 ntBASIC3.57□□□□□ -1.84
MMP3P08254 PSMA2P1-201ENST00000526365 646 ntBASIC3.57□□□□□ -1.84
MMP3P08254 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MMP3P08254 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
MMP3P08254 AC022080.3-201ENST00000544433 482 ntBASIC3.57□□□□□ -1.84
MMP3P08254 ZNF519P2-201ENST00000557032 169 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.57□□□□□ -1.84
MMP3P08254 AC092325.1-201ENST00000566449 554 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.57□□□□□ -1.84
MMP3P08254 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP3P08254 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.57□□□□□ -1.84
MMP3P08254 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.57□□□□□ -1.84
MMP3P08254 RBM11P1-201ENST00000604951 799 ntBASIC3.57□□□□□ -1.84
MMP3P08254 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AC103710.2-201ENST00000609912 942 ntBASIC3.57□□□□□ -1.84
MMP3P08254 AL450472.3-201ENST00000615578 367 ntBASIC3.57□□□□□ -1.84
MMP3P08254 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.57□□□□□ -1.84
MMP3P08254 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MMP3P08254 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
MMP3P08254 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MMP3P08254 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MMP3P08254 SNORA80A-201ENST00000363922 136 ntBASIC3.56□□□□□ -1.84
MMP3P08254 Y_RNA.256-201ENST00000364594 104 ntBASIC3.56□□□□□ -1.84
MMP3P08254 RNU6-1074P-201ENST00000383995 104 ntBASIC3.56□□□□□ -1.84
MMP3P08254 RNA5SP107-201ENST00000411358 122 ntBASIC3.56□□□□□ -1.84
MMP3P08254 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MMP3P08254 CCDC58P2-201ENST00000417131 366 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP3P08254 AC002075.2-201ENST00000425207 252 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.56□□□□□ -1.84
MMP3P08254 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
MMP3P08254 AL136380.1-201ENST00000447970 162 ntBASIC3.56□□□□□ -1.84
MMP3P08254 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP3P08254 ELOCP23-201ENST00000452014 332 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.56□□□□□ -1.84
MMP3P08254 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.56□□□□□ -1.84
MMP3P08254 AL049714.1-201ENST00000466686 347 ntBASIC3.56□□□□□ -1.84
MMP3P08254 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.56□□□□□ -1.84
MMP3P08254 AC019235.1-201ENST00000503847 207 ntBASIC3.56□□□□□ -1.84
MMP3P08254 SNORA31.20-201ENST00000517111 133 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AP001893.2-201ENST00000526949 202 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AP002404.1-201ENST00000532005 451 ntBASIC3.56□□□□□ -1.84
MMP3P08254 ARL2BPP2-201ENST00000550907 489 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AC006270.2-201ENST00000578523 652 ntBASIC3.56□□□□□ -1.84
MMP3P08254 SNRPGP15-201ENST00000600149 222 ntBASIC3.56□□□□□ -1.84
MMP3P08254 AC093732.2-201ENST00000607950 274 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 205.1 ms