Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.13□□□□□ -1.91
COL5A2P05997 VN1R17P-201ENST00000472048 1090 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 TRBV1-201ENST00000476502 284 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AC012170.1-201ENST00000495139 359 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
COL5A2P05997 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.13□□□□□ -1.91
COL5A2P05997 RNU6-583P-201ENST00000516012 92 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 RNA5SP458-201ENST00000516188 119 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 RNU6-347P-201ENST00000516658 105 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 AP002453.2-201ENST00000533503 320 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AC084757.1-201ENST00000559987 490 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.13□□□□□ -1.91
COL5A2P05997 AC008687.2-201ENST00000597865 520 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AC007684.1-201ENST00000609671 477 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 AL355073.2-201ENST00000612106 557 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.13□□□□□ -1.91
COL5A2P05997 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL5A2P05997 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL5A2P05997 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
COL5A2P05997 ZNF37BP-203ENST00000452306 1352 ntBASIC3.13□□□□□ -1.91
COL5A2P05997 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
COL5A2P05997 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A2P05997 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A2P05997 AC092326.2-201ENST00000624772 1561 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 FGF7P2-201ENST00000332473 296 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 RNU6-216P-201ENST00000363282 104 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 RNU6-657P-201ENST00000383904 107 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A2P05997 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A2P05997 AL162578.1-201ENST00000406202 378 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC009237.2-201ENST00000421358 284 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A2P05997 MRPS10P2-201ENST00000431226 381 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AL596276.1-201ENST00000434465 418 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 AC018634.1-201ENST00000437554 401 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC241584.1-201ENST00000438469 1241 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AL662791.1-201ENST00000441992 928 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A2P05997 HMGB1P15-201ENST00000453854 435 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 MTND2P33-201ENST00000506452 1031 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
COL5A2P05997 MTND5P4-201ENST00000514978 288 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A2P05997 MTCYBP41-201ENST00000528913 1123 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.12□□□□□ -1.91
COL5A2P05997 AC018630.1-201ENST00000541376 925 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.12□□□□□ -1.91
COL5A2P05997 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.12□□□□□ -1.91
COL5A2P05997 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.12□□□□□ -1.91
COL5A2P05997 AC136619.2-201ENST00000563361 631 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 MIR5007-201ENST00000583098 95 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AL596327.1-201ENST00000603629 213 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 NDUFA8P1-201ENST00000605525 367 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC009318.2-201ENST00000610917 651 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 MIR6873-201ENST00000622788 63 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 AC116563.2-201ENST00000624751 535 ntBASIC3.12□□□□□ -1.91
COL5A2P05997 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.12□□□□□ -1.91
COL5A2P05997 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A2P05997 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
COL5A2P05997 RNU6-259P-201ENST00000383999 107 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 RNU6-1151P-201ENST00000384684 107 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
COL5A2P05997 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A2P05997 MTND1P21-201ENST00000412991 285 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 HMGB1P11-201ENST00000413899 637 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 PRELID3BP11-201ENST00000414230 479 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AL031736.2-201ENST00000426573 787 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AC010975.2-201ENST00000427781 588 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A2P05997 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A2P05997 AC010881.1-201ENST00000433830 235 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AL031667.1-201ENST00000440222 725 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A2P05997 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A2P05997 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.11□□□□□ -1.91
COL5A2P05997 RN7SL297P-201ENST00000483161 293 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A2P05997 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A2P05997 RNU6-150P-201ENST00000516237 95 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 DEFB131D-201ENST00000526803 184 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.11□□□□□ -1.91
COL5A2P05997 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.11□□□□□ -1.91
COL5A2P05997 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A2P05997 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.11□□□□□ -1.91
COL5A2P05997 HSPE1P14-201ENST00000605812 302 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 RNU6-88P-201ENST00000606801 100 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AC126118.1-201ENST00000607744 628 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AF250324.2-201ENST00000608299 610 ntBASIC3.11□□□□□ -1.91
COL5A2P05997 AL589743.7-201ENST00000612637 233 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms