Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
APOBP04114 SSXP9-201ENST00000417503 292 ntBASIC0.57□□□□□ -2.32
APOBP04114 MRPS36P1-201ENST00000421291 307 ntBASIC0.57□□□□□ -2.32
APOBP04114 RPL30P3-201ENST00000424262 333 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC0.57□□□□□ -2.32
APOBP04114 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 LLPHP1-201ENST00000603571 367 ntBASIC0.57□□□□□ -2.32
APOBP04114 FO393413.1-201ENST00000402892 195 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC099548.1-201ENST00000421443 426 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.57□□□□□ -2.32
APOBP04114 ARL5AP2-201ENST00000444698 533 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 OSBPL9P3-201ENST00000534523 595 ntBASIC0.57□□□□□ -2.32
APOBP04114 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC0.57□□□□□ -2.32
APOBP04114 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.57□□□□□ -2.32
APOBP04114 CR382285.2-201ENST00000624662 1495 ntBASIC0.57□□□□□ -2.32
APOBP04114 AL512661.1-201ENST00000434586 1253 ntBASIC0.57□□□□□ -2.32
APOBP04114 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.57□□□□□ -2.32
APOBP04114 CASP3P1-201ENST00000446037 609 ntBASIC0.57□□□□□ -2.32
APOBP04114 AL353718.1-201ENST00000451028 517 ntBASIC0.57□□□□□ -2.32
APOBP04114 AC005908.1-201ENST00000468701 347 ntBASIC0.57□□□□□ -2.32
APOBP04114 RNA5SP471-201ENST00000516971 106 ntBASIC0.57□□□□□ -2.32
APOBP04114 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
APOBP04114 AP003122.6-201ENST00000623831 495 ntBASIC0.57□□□□□ -2.32
APOBP04114 RNU6-105P-201ENST00000363909 104 ntBASIC0.56□□□□□ -2.32
APOBP04114 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
APOBP04114 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.56□□□□□ -2.32
APOBP04114 USP12PX-201ENST00000432383 1057 ntBASIC0.56□□□□□ -2.32
APOBP04114 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.56□□□□□ -2.32
APOBP04114 AC073055.1-201ENST00000456901 1621 ntBASIC0.56□□□□□ -2.32
APOBP04114 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
APOBP04114 MTND4P31-201ENST00000425607 1343 ntBASIC0.56□□□□□ -2.32
APOBP04114 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC0.56□□□□□ -2.32
APOBP04114 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
APOBP04114 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC0.56□□□□□ -2.32
APOBP04114 OR5B19P-201ENST00000531766 928 ntBASIC0.56□□□□□ -2.32
APOBP04114 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.56□□□□□ -2.32
APOBP04114 MIR4698-201ENST00000577795 80 ntBASIC0.56□□□□□ -2.32
APOBP04114 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC0.56□□□□□ -2.32
APOBP04114 DPRXP5-201ENST00000604662 539 ntBASIC0.56□□□□□ -2.32
APOBP04114 HSPE1P14-201ENST00000605812 302 ntBASIC0.56□□□□□ -2.32
APOBP04114 HSPE1P22-201ENST00000456856 327 ntBASIC0.56□□□□□ -2.32
APOBP04114 MRPS33P3-201ENST00000513456 322 ntBASIC0.56□□□□□ -2.32
APOBP04114 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.56□□□□□ -2.32
APOBP04114 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC0.56□□□□□ -2.32
APOBP04114 AC138473.1-201ENST00000605717 526 ntBASIC0.56□□□□□ -2.32
APOBP04114 MIR6759-201ENST00000638110 65 ntBASIC0.56□□□□□ -2.32
APOBP04114 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC0.55□□□□□ -2.32
APOBP04114 TRGV6-201ENST00000417928 299 ntBASIC0.55□□□□□ -2.32
APOBP04114 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC0.55□□□□□ -2.32
APOBP04114 AC114786.4-201ENST00000508771 728 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC0.55□□□□□ -2.32
APOBP04114 AC114797.1-201ENST00000514003 728 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC0.55□□□□□ -2.32
APOBP04114 AC024619.4-201ENST00000580924 316 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC091925.1-201ENST00000623204 462 ntBASIC0.55□□□□□ -2.32
APOBP04114 NACAP2-201ENST00000318548 624 ntBASIC0.55□□□□□ -2.32
APOBP04114 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.55□□□□□ -2.32
APOBP04114 Z80107.1-201ENST00000436830 412 ntBASIC0.55□□□□□ -2.32
APOBP04114 AL627224.1-201ENST00000448334 444 ntBASIC0.55□□□□□ -2.32
APOBP04114 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC0.55□□□□□ -2.32
APOBP04114 SUMO2P2-201ENST00000456482 255 ntBASIC0.55□□□□□ -2.32
APOBP04114 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC0.55□□□□□ -2.32
APOBP04114 AC025768.1-201ENST00000510057 267 ntBASIC0.55□□□□□ -2.32
APOBP04114 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC0.55□□□□□ -2.32
APOBP04114 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 AC004808.1-201ENST00000627671 721 ntBASIC0.55□□□□□ -2.32
APOBP04114 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 Y_RNA.280-201ENST00000364765 112 ntBASIC0.55□□□□□ -2.32
APOBP04114 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC0.55□□□□□ -2.32
APOBP04114 JTBP1-201ENST00000441314 247 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 RPL26P9-201ENST00000457466 433 ntBASIC0.55□□□□□ -2.32
APOBP04114 AF279873.1-201ENST00000523393 313 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 AC104229.1-201ENST00000561364 255 ntBASIC0.55□□□□□ -2.32
APOBP04114 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 AC006249.1-201ENST00000621223 471 ntBASIC0.55□□□□□ -2.32
APOBP04114 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC0.55□□□□□ -2.32
APOBP04114 RNA5SP331-201ENST00000364986 107 ntBASIC0.54□□□□□ -2.32
APOBP04114 RNU6-17P-201ENST00000384245 107 ntBASIC0.54□□□□□ -2.32
APOBP04114 RNU6-18P-201ENST00000384527 107 ntBASIC0.54□□□□□ -2.32
APOBP04114 RPS27P23-201ENST00000487608 251 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC105252.1-201ENST00000503089 286 ntBASIC0.54□□□□□ -2.32
APOBP04114 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC004908.2-201ENST00000609090 574 ntBASIC0.54□□□□□ -2.32
APOBP04114 AL161734.1-201ENST00000609720 557 ntBASIC0.54□□□□□ -2.32
APOBP04114 RNU6-666P-201ENST00000363499 107 ntBASIC0.54□□□□□ -2.32
APOBP04114 AL022238.1-201ENST00000442557 355 ntBASIC0.54□□□□□ -2.32
APOBP04114 AL135752.1-201ENST00000479477 471 ntBASIC0.54□□□□□ -2.32
APOBP04114 MIR6857-201ENST00000613267 93 ntBASIC0.54□□□□□ -2.32
APOBP04114 CUL4AP1-201ENST00000514750 1863 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC025263.3-201ENST00000622965 1396 ntBASIC0.54□□□□□ -2.32
APOBP04114 ANAPC10P1-201ENST00000395991 556 ntBASIC0.54□□□□□ -2.32
APOBP04114 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.54□□□□□ -2.32
APOBP04114 PMCHL2-203ENST00000457791 237 ntBASIC0.54□□□□□ -2.32
APOBP04114 AC104472.2-201ENST00000469035 601 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms