Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 RPL7P30-201ENST00000420888 709 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AL139421.1-201ENST00000423010 169 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC027124.2-201ENST00000428249 105 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AL356320.1-201ENST00000429616 163 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MTND1P32-201ENST00000433043 938 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AL022578.1-201ENST00000439330 1433 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MTND3P1-201ENST00000441336 220 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 EEF1E1P1-201ENST00000446998 430 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC025033.1-201ENST00000463883 194 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC087359.1-201ENST00000508335 1740 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC008716.1-201ENST00000511084 513 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC093677.1-201ENST00000514414 678 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 RNU6-1095P-201ENST00000516148 108 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 HSPA8P13-201ENST00000523715 472 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 MTCO1P47-201ENST00000523889 1271 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC023538.1-201ENST00000534576 736 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC024224.1-201ENST00000538284 609 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MIR1273D-201ENST00000577266 86 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.38□□□□□ -2.03
CTDNEP1O95476 MIR5194-201ENST00000582634 120 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AL158042.1-201ENST00000605338 460 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC103710.1-201ENST00000610003 901 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 Y_RNA.783-201ENST00000613546 102 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC011330.2-201ENST00000621680 635 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 AC006927.4-201ENST00000639187 543 ntBASIC2.38□□□□□ -2.03
CTDNEP1O95476 RNU4-28P-201ENST00000364739 141 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 RNU6-878P-201ENST00000384578 110 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 ANAPC10P1-201ENST00000395991 556 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 HMGB1P17-201ENST00000403495 628 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 RNU2-47P-201ENST00000410649 186 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 PIGPP2-201ENST00000411569 458 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 HMGB3P2-201ENST00000411913 584 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 TPMTP2-201ENST00000414372 726 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 RPL7P37-201ENST00000425095 738 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 MTCO3P30-201ENST00000426425 670 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 Z98742.2-201ENST00000431564 187 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 CBWD4P-201ENST00000445695 655 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 SNRPGP6-201ENST00000451124 220 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AL353691.1-201ENST00000451332 387 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC097493.1-201ENST00000463958 372 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 RPL7P18-201ENST00000478965 734 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC109486.1-201ENST00000486833 374 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC023424.2-201ENST00000493479 777 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 CDC42P4-201ENST00000510507 563 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 OR5AK1P-201ENST00000524837 922 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AP000867.2-201ENST00000532468 320 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 DUXAP1-201ENST00000556632 463 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 RPS3AP23-202ENST00000574601 686 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC008993.2-201ENST00000631744 806 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 AC110079.1-202ENST00000635213 138 ntBASIC2.37□□□□□ -2.03
CTDNEP1O95476 ZNF658B-202ENST00000615961 3375 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 OR4G11P-202ENST00000642116 1414 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 RNU6-777P-201ENST00000364265 104 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 MTCYBP38-201ENST00000417160 1123 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AL953862.1-201ENST00000423016 168 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 RPL27AP8-201ENST00000424277 446 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC096638.1-201ENST00000444678 216 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 BX322784.1-201ENST00000455793 1077 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 SUMO2P2-201ENST00000456482 255 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC090255.1-201ENST00000495779 349 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 AC114981.1-201ENST00000503897 678 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 RPL37P25-201ENST00000507308 276 ntBASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.36□□□□□ -2.03
CTDNEP1O95476 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms