Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX6O95475 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX6O95475 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX6O95475 TAAR7P-201ENST00000436141 242 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX6O95475 UBE2V1P5-201ENST00000440070 405 ntBASIC1.07□□□□□ -2.24
SIX6O95475 RAB11AP1-201ENST00000442978 646 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AL592447.1-201ENST00000447592 540 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.07□□□□□ -2.24
SIX6O95475 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 AC114786.4-201ENST00000508771 728 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AC114797.1-201ENST00000514003 728 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 SNORA25.15-201ENST00000516487 89 ntBASIC1.07□□□□□ -2.24
SIX6O95475 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC1.07□□□□□ -2.24
SIX6O95475 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 AC011611.5-201ENST00000552477 578 ntBASIC1.07□□□□□ -2.24
SIX6O95475 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.07□□□□□ -2.24
SIX6O95475 MIR4648-201ENST00000580107 72 ntBASIC1.07□□□□□ -2.24
SIX6O95475 HMGN2P15-201ENST00000585707 270 ntBASIC1.07□□□□□ -2.24
SIX6O95475 NRBF2P1-201ENST00000587407 859 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AL773524.1-201ENST00000614065 229 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AP002791.1-201ENST00000623291 381 ntBASIC1.07□□□□□ -2.24
SIX6O95475 AC090772.4-201ENST00000623599 362 ntBASIC1.07□□□□□ -2.24
SIX6O95475 MIR7157-201ENST00000635801 60 ntBASIC1.07□□□□□ -2.24
SIX6O95475 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
SIX6O95475 RNU6-1155P-201ENST00000363554 107 ntBASIC1.06□□□□□ -2.24
SIX6O95475 RNU6-673P-201ENST00000365084 104 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AL589655.1-201ENST00000405398 482 ntBASIC1.06□□□□□ -2.24
SIX6O95475 SPA17P1-201ENST00000416656 452 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AL158823.1-201ENST00000418441 478 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.06□□□□□ -2.24
SIX6O95475 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.06□□□□□ -2.24
SIX6O95475 snoU109.4-201ENST00000458953 143 ntBASIC1.06□□□□□ -2.24
SIX6O95475 MTCYBP18-201ENST00000501056 747 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC008834.1-201ENST00000511612 175 ntBASIC1.06□□□□□ -2.24
SIX6O95475 RNU6-1282P-201ENST00000516735 96 ntBASIC1.06□□□□□ -2.24
SIX6O95475 SCARNA3-201ENST00000517097 143 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.06□□□□□ -2.24
SIX6O95475 AL391261.3-201ENST00000557194 520 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.06□□□□□ -2.24
SIX6O95475 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.06□□□□□ -2.24
SIX6O95475 SNORD53B-201ENST00000577887 78 ntBASIC1.06□□□□□ -2.24
SIX6O95475 MIR4672-201ENST00000583126 81 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC008121.1-201ENST00000603244 268 ntBASIC1.06□□□□□ -2.24
SIX6O95475 PRR13P7-201ENST00000605538 430 ntBASIC1.06□□□□□ -2.24
SIX6O95475 AC068276.1-201ENST00000605793 379 ntBASIC1.06□□□□□ -2.24
SIX6O95475 MIR6798-201ENST00000612887 67 ntBASIC1.06□□□□□ -2.24
SIX6O95475 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.06□□□□□ -2.24
SIX6O95475 ZNF663P-202ENST00000641770 1131 ntBASIC1.06□□□□□ -2.24
SIX6O95475 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
SIX6O95475 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SIX6O95475 RNU6-670P-201ENST00000364312 104 ntBASIC1.05□□□□□ -2.24
SIX6O95475 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.05□□□□□ -2.24
SIX6O95475 TAF9BP2-201ENST00000400856 499 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC023141.4-201ENST00000412031 328 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.05□□□□□ -2.24
SIX6O95475 EDDM3CP-201ENST00000415977 425 ntBASIC1.05□□□□□ -2.24
SIX6O95475 OR4K6P-201ENST00000416478 897 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC244636.1-201ENST00000421152 228 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.05□□□□□ -2.24
SIX6O95475 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.05□□□□□ -2.24
SIX6O95475 MICF-203ENST00000432679 129 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC024082.2-201ENST00000434771 238 ntBASIC1.05□□□□□ -2.24
SIX6O95475 UBE2D3P1-201ENST00000436669 444 ntBASIC1.05□□□□□ -2.24
SIX6O95475 BNIP3P2-201ENST00000441221 577 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.05□□□□□ -2.24
SIX6O95475 AC015724.1-201ENST00000478577 156 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC008526.1-201ENST00000509149 338 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC1.05□□□□□ -2.24
SIX6O95475 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
SIX6O95475 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.05□□□□□ -2.24
SIX6O95475 MIR3126-201ENST00000577443 74 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC105224.1-201ENST00000587055 421 ntBASIC1.05□□□□□ -2.24
SIX6O95475 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.05□□□□□ -2.24
SIX6O95475 MTCO3P22-201ENST00000603219 784 ntBASIC1.05□□□□□ -2.24
SIX6O95475 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
SIX6O95475 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SIX6O95475 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
SIX6O95475 ZNF29P-201ENST00000225587 168 ntBASIC1.04□□□□□ -2.24
SIX6O95475 RNU6-60P-201ENST00000364792 103 ntBASIC1.04□□□□□ -2.24
SIX6O95475 SNORD82-201ENST00000365530 70 ntBASIC1.04□□□□□ -2.24
SIX6O95475 Y_RNA.510-201ENST00000384511 114 ntBASIC1.04□□□□□ -2.24
SIX6O95475 RNU6-1151P-201ENST00000384684 107 ntBASIC1.04□□□□□ -2.24
SIX6O95475 SNORA11.1-201ENST00000408133 129 ntBASIC1.04□□□□□ -2.24
SIX6O95475 OR51A5P-201ENST00000415429 942 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.04□□□□□ -2.24
SIX6O95475 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.04□□□□□ -2.24
SIX6O95475 BOLA3P4-201ENST00000418151 400 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.04□□□□□ -2.24
SIX6O95475 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SIX6O95475 BMI1P1-201ENST00000445879 941 ntBASIC1.04□□□□□ -2.24
SIX6O95475 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.04□□□□□ -2.24
SIX6O95475 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.04□□□□□ -2.24
SIX6O95475 AL049873.1-201ENST00000480540 376 ntBASIC1.04□□□□□ -2.24
SIX6O95475 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
SIX6O95475 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms