Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.03□□□□□ -1.92
SIX3O95343 AC239868.4-201ENST00000608318 671 ntBASIC3.03□□□□□ -1.92
SIX3O95343 MIR7844-201ENST00000616161 122 ntBASIC3.03□□□□□ -1.92
SIX3O95343 AC110079.1-202ENST00000635213 138 ntBASIC3.03□□□□□ -1.92
SIX3O95343 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SIX3O95343 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SIX3O95343 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
SIX3O95343 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 RNU6-217P-201ENST00000384164 104 ntBASIC3.02□□□□□ -1.93
SIX3O95343 SNORD67-201ENST00000390833 111 ntBASIC3.02□□□□□ -1.93
SIX3O95343 RPL7P8-201ENST00000411964 730 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC104651.1-201ENST00000427559 735 ntBASIC3.02□□□□□ -1.93
SIX3O95343 OR2AS1P-201ENST00000427827 319 ntBASIC3.02□□□□□ -1.93
SIX3O95343 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIX3O95343 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX3O95343 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.02□□□□□ -1.93
SIX3O95343 UBE2D3P1-201ENST00000436669 444 ntBASIC3.02□□□□□ -1.93
SIX3O95343 ST13P20-201ENST00000447996 1065 ntBASIC3.02□□□□□ -1.93
SIX3O95343 RNU7-23P-201ENST00000459465 62 ntBASIC3.02□□□□□ -1.93
SIX3O95343 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 RNU6-759P-201ENST00000516740 103 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC022616.6-201ENST00000520479 119 ntBASIC3.02□□□□□ -1.93
SIX3O95343 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.02□□□□□ -1.93
SIX3O95343 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 MIR4769-201ENST00000584126 77 ntBASIC3.02□□□□□ -1.93
SIX3O95343 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
SIX3O95343 MTND4LP5-201ENST00000605152 292 ntBASIC3.02□□□□□ -1.93
SIX3O95343 OR2AS2P-201ENST00000606902 342 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.02□□□□□ -1.93
SIX3O95343 AC027807.2-201ENST00000616099 408 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC006338.1-201ENST00000618453 749 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC079248.2-201ENST00000623779 326 ntBASIC3.02□□□□□ -1.93
SIX3O95343 AC068057.2-201ENST00000624047 895 ntBASIC3.02□□□□□ -1.93
SIX3O95343 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.02□□□□□ -1.93
SIX3O95343 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SIX3O95343 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SIX3O95343 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX3O95343 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.01□□□□□ -1.93
SIX3O95343 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
SIX3O95343 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SIX3O95343 RNY4P16-201ENST00000364768 94 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RPL7P25-201ENST00000404151 721 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RNA5SP247-201ENST00000411181 105 ntBASIC3.01□□□□□ -1.93
SIX3O95343 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
SIX3O95343 AL353777.1-201ENST00000425552 326 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC119618.1-201ENST00000434191 222 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX3O95343 MTND4P25-201ENST00000441039 533 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX3O95343 MTATP6P30-201ENST00000443540 664 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RN7SL863P-201ENST00000462370 296 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC110794.1-201ENST00000505816 425 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RNU6-201P-201ENST00000517100 61 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RN7SKP258-201ENST00000517151 304 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX3O95343 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SIX3O95343 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC145350.1-201ENST00000567426 208 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.01□□□□□ -1.93
SIX3O95343 UBL5P2-201ENST00000583788 219 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX3O95343 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.01□□□□□ -1.93
SIX3O95343 AC005498.1-201ENST00000592125 465 ntBASIC3.01□□□□□ -1.93
SIX3O95343 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX3O95343 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SIX3O95343 MAPK10-322ENST00000641485 4530 ntBASIC3.01□□□□□ -1.93
SIX3O95343 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SIX3O95343 AC099654.7-201ENST00000635788 2127 ntBASIC3.01□□□□□ -1.93
SIX3O95343 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.01□□□□□ -1.93
SIX3O95343 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3□□□□□ -1.93
SIX3O95343 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SIX3O95343 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SIX3O95343 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SIX3O95343 MIR449A-201ENST00000362113 91 ntBASIC3□□□□□ -1.93
SIX3O95343 RNU6-1167P-201ENST00000363227 94 ntBASIC3□□□□□ -1.93
SIX3O95343 RNU6-884P-201ENST00000363889 107 ntBASIC3□□□□□ -1.93
SIX3O95343 SNORA80A-201ENST00000363922 136 ntBASIC3□□□□□ -1.93
SIX3O95343 SNORD21-201ENST00000383953 95 ntBASIC3□□□□□ -1.93
SIX3O95343 RNU6-701P-201ENST00000384059 107 ntBASIC3□□□□□ -1.93
SIX3O95343 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3□□□□□ -1.93
SIX3O95343 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3□□□□□ -1.93
SIX3O95343 USP9YP13-201ENST00000417797 480 ntBASIC3□□□□□ -1.93
SIX3O95343 AL645937.1-202ENST00000421799 937 ntBASIC3□□□□□ -1.93
SIX3O95343 RAC1P6-201ENST00000423911 575 ntBASIC3□□□□□ -1.93
SIX3O95343 AC005326.1-201ENST00000429197 123 ntBASIC3□□□□□ -1.93
SIX3O95343 GPM6BP2-201ENST00000432046 144 ntBASIC3□□□□□ -1.93
SIX3O95343 AC010153.1-201ENST00000432862 727 ntBASIC3□□□□□ -1.93
SIX3O95343 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
SIX3O95343 GPM6BP1-201ENST00000446387 144 ntBASIC3□□□□□ -1.93
SIX3O95343 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms