Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CACNA1FO60840 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1FO60840 Y_RNA.296-201ENST00000364930 108 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 RNU5A-6P-201ENST00000384136 116 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 Y_RNA.554-201ENST00000384672 102 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1FO60840 AL139098.1-201ENST00000407291 389 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 Y_RNA.598-201ENST00000410480 95 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC092427.1-201ENST00000439177 601 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 NDUFA5P7-201ENST00000452914 242 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1FO60840 RNA5SP309-201ENST00000516670 106 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 SNORA18.6-201ENST00000516792 115 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA1FO60840 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC012531.5-201ENST00000611375 151 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CACNA1FO60840 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC006378.2-201ENST00000623178 2476 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1FO60840 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 SNORA41-201ENST00000384675 132 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AL133384.1-201ENST00000412744 351 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC000111.3-201ENST00000433478 193 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 RPL37P21-201ENST00000435890 276 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 ARPC3P1-201ENST00000437218 533 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 OR6K1P-201ENST00000456766 971 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 snoU109.1-201ENST00000459339 135 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC010301.1-201ENST00000473936 355 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 AC092325.1-201ENST00000566449 554 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.18□□□□□ -1.9
CACNA1FO60840 BBIP1P1-201ENST00000602999 279 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC007621.1-201ENST00000604544 437 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 AC107294.1-201ENST00000609524 467 ntBASIC3.18□□□□□ -1.9
CACNA1FO60840 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CACNA1FO60840 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CACNA1FO60840 OR4G11P-202ENST00000642116 1414 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 RNA5SP432-201ENST00000362480 116 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 RNA5SP88-201ENST00000365560 109 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 CCDC58P2-201ENST00000417131 366 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC092634.6-201ENST00000418558 192 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.17□□□□□ -1.9
CACNA1FO60840 RPL39P6-201ENST00000448289 150 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1FO60840 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1FO60840 RPL9P6-201ENST00000492764 598 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC116353.2-201ENST00000505332 712 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC006499.2-201ENST00000513470 337 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.17□□□□□ -1.9
CACNA1FO60840 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1FO60840 AC124947.2-202ENST00000552735 133 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 TPRKBP2-201ENST00000565969 475 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1FO60840 AC136618.2-201ENST00000575091 400 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 MIR548S-201ENST00000581352 82 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1FO60840 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.17□□□□□ -1.9
CACNA1FO60840 AL589743.7-201ENST00000612637 233 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AL359314.1-201ENST00000616913 261 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 AC002076.2-201ENST00000617362 122 ntBASIC3.17□□□□□ -1.9
CACNA1FO60840 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.17□□□□□ -1.9
CACNA1FO60840 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.17□□□□□ -1.9
CACNA1FO60840 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1FO60840 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1FO60840 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1FO60840 RNU5E-4P-201ENST00000364931 120 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RNU6-657P-201ENST00000383904 107 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 SNORD116-23-201ENST00000384645 92 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AL121972.1-201ENST00000402023 252 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 RN7SKP223-201ENST00000410582 62 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 HMGN1P14-201ENST00000412459 517 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.16□□□□□ -1.9
CACNA1FO60840 MTND3P17-201ENST00000416968 344 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.16□□□□□ -1.9
CACNA1FO60840 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 DNAJC19P4-201ENST00000440115 345 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CACNA1FO60840 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AC023424.2-201ENST00000493479 777 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.16□□□□□ -1.9
CACNA1FO60840 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC3.16□□□□□ -1.9
CACNA1FO60840 AP004247.1-201ENST00000531556 1289 ntBASIC3.16□□□□□ -1.9
CACNA1FO60840 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms