Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNU6-223P-201ENST00000362830 107 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RNU6-511P-201ENST00000363496 107 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RNU6-108P-201ENST00000365558 107 ntBASIC3.1□□□□□ -1.91
PRKNO60260 Y_RNA.453-201ENST00000384223 109 ntBASIC3.1□□□□□ -1.91
PRKNO60260 CIR1P3-201ENST00000405137 479 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RNA5SP120-201ENST00000410900 112 ntBASIC3.1□□□□□ -1.91
PRKNO60260 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 AC126124.2-201ENST00000413542 321 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AL356968.1-201ENST00000416622 474 ntBASIC3.1□□□□□ -1.91
PRKNO60260 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.1□□□□□ -1.91
PRKNO60260 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 AC016696.1-201ENST00000446949 318 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RPL23AP20-201ENST00000447965 421 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 SNRPGP6-201ENST00000451124 220 ntBASIC3.1□□□□□ -1.91
PRKNO60260 FGF7P6-202ENST00000451282 293 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 MTND2P24-201ENST00000453434 806 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 RPS4XP2-201ENST00000458402 793 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC008481.1-201ENST00000463278 396 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RN7SL601P-201ENST00000471221 293 ntBASIC3.1□□□□□ -1.91
PRKNO60260 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKNO60260 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.1□□□□□ -1.91
PRKNO60260 KLHL2P1-201ENST00000508691 521 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RNU2-10P-201ENST00000516375 211 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RNU6-410P-201ENST00000517006 107 ntBASIC3.1□□□□□ -1.91
PRKNO60260 HMGB1P41-201ENST00000520234 440 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC134698.4-201ENST00000523451 826 ntBASIC3.1□□□□□ -1.91
PRKNO60260 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKNO60260 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.1□□□□□ -1.91
PRKNO60260 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.1□□□□□ -1.91
PRKNO60260 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 MIR5047-201ENST00000579212 100 ntBASIC3.1□□□□□ -1.91
PRKNO60260 MIR3690-201ENST00000580266 75 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC105224.1-201ENST00000587055 421 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC006557.5-201ENST00000603126 811 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC004067.1-201ENST00000608733 700 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AC017083.3-201ENST00000609955 700 ntBASIC3.1□□□□□ -1.91
PRKNO60260 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.1□□□□□ -1.91
PRKNO60260 U7.8-201ENST00000619968 63 ntBASIC3.1□□□□□ -1.91
PRKNO60260 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
PRKNO60260 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
PRKNO60260 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
PRKNO60260 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
PRKNO60260 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
PRKNO60260 AL021368.2-201ENST00000606125 5352 ntBASIC3.09□□□□□ -1.91
PRKNO60260 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
PRKNO60260 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
PRKNO60260 RNU6-1097P-201ENST00000363586 107 ntBASIC3.09□□□□□ -1.91
PRKNO60260 SNORA51.2-201ENST00000364595 132 ntBASIC3.09□□□□□ -1.91
PRKNO60260 SNORA23-201ENST00000365128 182 ntBASIC3.09□□□□□ -1.91
PRKNO60260 RNU6-1283P-201ENST00000365314 105 ntBASIC3.09□□□□□ -1.91
PRKNO60260 Y_RNA.402-201ENST00000383972 102 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AL136372.1-201ENST00000403060 228 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.09□□□□□ -1.91
PRKNO60260 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 PPP1R11P2-201ENST00000423543 382 ntBASIC3.09□□□□□ -1.91
PRKNO60260 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 MTND1P2-201ENST00000430604 821 ntBASIC3.09□□□□□ -1.91
PRKNO60260 RPL7P54-201ENST00000438336 674 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC079781.2-201ENST00000446424 169 ntBASIC3.09□□□□□ -1.91
PRKNO60260 Z75741.1-201ENST00000446793 314 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 AC027673.1-201ENST00000456245 405 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKNO60260 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.09□□□□□ -1.91
PRKNO60260 AL049830.2-201ENST00000480072 201 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.09□□□□□ -1.91
PRKNO60260 FAM92A1P2-202ENST00000504766 877 ntBASIC3.09□□□□□ -1.91
PRKNO60260 HMGB1P22-201ENST00000505315 124 ntBASIC3.09□□□□□ -1.91
PRKNO60260 MLLT10P2-201ENST00000506434 249 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKNO60260 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKNO60260 RNU7-51P-201ENST00000516560 62 ntBASIC3.09□□□□□ -1.91
PRKNO60260 Y_RNA.693-201ENST00000516641 110 ntBASIC3.09□□□□□ -1.91
PRKNO60260 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
PRKNO60260 AP003072.2-201ENST00000527756 676 ntBASIC3.09□□□□□ -1.91
PRKNO60260 OR4R1P-201ENST00000529879 463 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.09□□□□□ -1.91
PRKNO60260 AP003034.1-201ENST00000534621 422 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC025678.1-201ENST00000567861 338 ntBASIC3.09□□□□□ -1.91
PRKNO60260 SNORA59B-202ENST00000578183 701 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AF038458.1-201ENST00000588406 262 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.09□□□□□ -1.91
PRKNO60260 AC007363.1-201ENST00000604736 620 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC008536.2-201ENST00000607284 349 ntBASIC3.09□□□□□ -1.91
PRKNO60260 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.09□□□□□ -1.91
PRKNO60260 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms