Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AL139247.1-201ENST00000422768 325 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 AL591419.1-201ENST00000427423 339 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 AL445584.1-201ENST00000431451 330 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 AF186190.1-201ENST00000517470 480 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 FAM60DP-201ENST00000524174 632 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 PTP4A1P6-201ENST00000531034 478 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 AL133271.1-201ENST00000538229 291 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.73□□□□□ -1.65
SRGAP3O43295 AC011155.2-201ENST00000623202 216 ntBASIC4.73□□□□□ -1.65
SRGAP3O43295 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.73□□□□□ -1.65
SRGAP3O43295 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SRGAP3O43295 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SRGAP3O43295 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
SRGAP3O43295 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRGAP3O43295 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
SRGAP3O43295 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRGAP3O43295 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRGAP3O43295 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 SOD2P1-201ENST00000396543 562 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 RNU2-36P-201ENST00000410361 191 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.72□□□□□ -1.65
SRGAP3O43295 RAC1P3-201ENST00000416129 580 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AL590609.2-201ENST00000421430 368 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC108059.2-201ENST00000434626 151 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC105402.2-201ENST00000438503 358 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC020550.1-201ENST00000447385 163 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.72□□□□□ -1.65
SRGAP3O43295 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 COX7A2P2-201ENST00000505291 250 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 RNA5SP164-201ENST00000516533 110 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.72□□□□□ -1.65
SRGAP3O43295 AC092747.3-201ENST00000603769 301 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AL137849.1-201ENST00000604767 169 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 SNORA62.6-201ENST00000606322 83 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 Z82243.1-201ENST00000609432 473 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 MIR6864-201ENST00000617935 70 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 AC025034.2-201ENST00000623264 286 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SRGAP3O43295 MTND5P10-201ENST00000603719 1809 ntBASIC4.72□□□□□ -1.65
SRGAP3O43295 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.65
SRGAP3O43295 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SRGAP3O43295 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.71□□□□□ -1.66
SRGAP3O43295 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SRGAP3O43295 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SRGAP3O43295 RNU6-1287P-201ENST00000362914 107 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 Y_RNA.167-201ENST00000363735 109 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 RNU6-1188P-201ENST00000363795 107 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 RNU6-188P-201ENST00000364207 107 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 Y_RNA.401-201ENST00000383965 117 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 RNU6-1060P-201ENST00000384664 107 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 U8.11-201ENST00000384699 133 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 U8.12-201ENST00000384701 133 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 MIR708-201ENST00000390708 88 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 RN7SKP202-201ENST00000410439 330 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AL391219.1-201ENST00000422570 483 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AL137792.2-201ENST00000443484 235 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 AL353691.1-201ENST00000451332 387 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 HMGB3P22-202ENST00000451823 572 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 SNORD121B-201ENST00000458838 81 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 U8.18-201ENST00000459285 133 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 MIR2053-201ENST00000459295 91 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 RPS27P27-201ENST00000498779 255 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SRGAP3O43295 MTCYBP40-201ENST00000509390 1135 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 AC098591.2-201ENST00000510152 315 ntBASIC4.71□□□□□ -1.66
SRGAP3O43295 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.71□□□□□ -1.66
SRGAP3O43295 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms