Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.3□□□□□ -1.88
CUX2O14529 USP9YP8-201ENST00000441913 500 ntBASIC3.3□□□□□ -1.88
CUX2O14529 RNF2P1-201ENST00000442955 1010 ntBASIC3.3□□□□□ -1.88
CUX2O14529 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
CUX2O14529 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC3.3□□□□□ -1.88
CUX2O14529 MTCO3P35-201ENST00000485582 781 ntBASIC3.3□□□□□ -1.88
CUX2O14529 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.3□□□□□ -1.88
CUX2O14529 AC010625.1-201ENST00000511296 403 ntBASIC3.3□□□□□ -1.88
CUX2O14529 RNU6-27P-201ENST00000516146 107 ntBASIC3.3□□□□□ -1.88
CUX2O14529 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.3□□□□□ -1.88
CUX2O14529 EEF1B2P4-201ENST00000551398 348 ntBASIC3.3□□□□□ -1.88
CUX2O14529 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.3□□□□□ -1.88
CUX2O14529 AC138915.2-201ENST00000569776 97 ntBASIC3.3□□□□□ -1.88
CUX2O14529 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.3□□□□□ -1.88
CUX2O14529 SNRPGP19-201ENST00000603826 189 ntBASIC3.3□□□□□ -1.88
CUX2O14529 OR10AB1P-201ENST00000609613 938 ntBASIC3.3□□□□□ -1.88
CUX2O14529 AL049777.1-201ENST00000622740 518 ntBASIC3.3□□□□□ -1.88
CUX2O14529 SNORD65.1-201ENST00000390889 71 ntBASIC3.29□□□□□ -1.88
CUX2O14529 SNRPEP2-201ENST00000397592 279 ntBASIC3.29□□□□□ -1.88
CUX2O14529 RNU4-65P-201ENST00000410473 140 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.29□□□□□ -1.88
CUX2O14529 NEK4P1-201ENST00000433383 879 ntBASIC3.29□□□□□ -1.88
CUX2O14529 SETP8-201ENST00000435341 628 ntBASIC3.29□□□□□ -1.88
CUX2O14529 HMGN2P16-201ENST00000456802 261 ntBASIC3.29□□□□□ -1.88
CUX2O14529 snoU109.4-201ENST00000458953 143 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AP000852.1-201ENST00000472460 573 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AC069528.1-202ENST00000482888 637 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CUX2O14529 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.29□□□□□ -1.88
CUX2O14529 AC087808.1-201ENST00000520501 361 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.29□□□□□ -1.88
CUX2O14529 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.29□□□□□ -1.88
CUX2O14529 AC136443.5-201ENST00000603741 370 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AL158050.2-201ENST00000605336 568 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AC131902.3-201ENST00000611767 581 ntBASIC3.29□□□□□ -1.88
CUX2O14529 AL355810.1-201ENST00000614629 552 ntBASIC3.29□□□□□ -1.88
CUX2O14529 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.29□□□□□ -1.88
CUX2O14529 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.29□□□□□ -1.88
CUX2O14529 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CUX2O14529 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CUX2O14529 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CUX2O14529 RNU6-657P-201ENST00000383904 107 ntBASIC3.28□□□□□ -1.88
CUX2O14529 RNU6-1074P-201ENST00000383995 104 ntBASIC3.28□□□□□ -1.88
CUX2O14529 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.28□□□□□ -1.88
CUX2O14529 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AC009961.3-201ENST00000449832 765 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AL445669.2-201ENST00000454425 421 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AL109741.2-201ENST00000455561 343 ntBASIC3.28□□□□□ -1.88
CUX2O14529 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.28□□□□□ -1.88
CUX2O14529 AC008526.1-201ENST00000509149 338 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MTND5P4-201ENST00000514978 288 ntBASIC3.28□□□□□ -1.88
CUX2O14529 SNORA31.8-201ENST00000516327 108 ntBASIC3.28□□□□□ -1.88
CUX2O14529 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.28□□□□□ -1.88
CUX2O14529 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.28□□□□□ -1.88
CUX2O14529 TMF1P1-201ENST00000576058 373 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AF129408.1-201ENST00000608767 431 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AC009269.6-201ENST00000621778 588 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MKKS-204ENST00000639674 192 ntBASIC3.28□□□□□ -1.88
CUX2O14529 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CUX2O14529 MTCO1P23-201ENST00000415223 1526 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AC107982.1-201ENST00000507171 1300 ntBASIC3.28□□□□□ -1.88
CUX2O14529 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CUX2O14529 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CUX2O14529 SET-203ENST00000372688 801 ntTSL 2 BASIC3.28□□□□□ -1.88
CUX2O14529 RNU6-878P-201ENST00000384578 110 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MIR598-201ENST00000384868 97 ntBASIC3.28□□□□□ -1.88
CUX2O14529 AC092447.6-201ENST00000414578 210 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MRPS36P1-201ENST00000421291 307 ntBASIC3.28□□□□□ -1.88
CUX2O14529 PSMA6P3-201ENST00000428242 164 ntBASIC3.28□□□□□ -1.88
CUX2O14529 ATP5F1P1-201ENST00000433775 569 ntBASIC3.28□□□□□ -1.88
CUX2O14529 GTF2IP3-201ENST00000433887 494 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MTCYBP11-201ENST00000447254 1109 ntBASIC3.28□□□□□ -1.88
CUX2O14529 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.28□□□□□ -1.88
CUX2O14529 AC007182.2-201ENST00000489251 402 ntBASIC3.28□□□□□ -1.88
CUX2O14529 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.28□□□□□ -1.88
CUX2O14529 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.28□□□□□ -1.88
CUX2O14529 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.28□□□□□ -1.88
CUX2O14529 BNIP3P24-201ENST00000593398 557 ntBASIC3.28□□□□□ -1.88
CUX2O14529 BNIP3P27-201ENST00000599991 412 ntBASIC3.28□□□□□ -1.88
CUX2O14529 U6.101-201ENST00000637707 76 ntBASIC3.28□□□□□ -1.88
CUX2O14529 OR4G1P-203ENST00000641984 1631 ntBASIC3.28□□□□□ -1.89
CUX2O14529 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.28□□□□□ -1.89
CUX2O14529 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CUX2O14529 MTND4P34-201ENST00000572715 1371 ntBASIC3.27□□□□□ -1.89
CUX2O14529 ZNF720P1-201ENST00000562403 1939 ntBASIC3.27□□□□□ -1.89
CUX2O14529 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CUX2O14529 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CUX2O14529 MIR625-201ENST00000385047 85 ntBASIC3.27□□□□□ -1.89
CUX2O14529 AC007435.1-201ENST00000421086 415 ntBASIC3.27□□□□□ -1.89
CUX2O14529 AC129850.1-201ENST00000436203 508 ntBASIC3.27□□□□□ -1.89
CUX2O14529 AC108734.3-201ENST00000481241 1165 ntBASIC3.27□□□□□ -1.89
CUX2O14529 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.27□□□□□ -1.89
CUX2O14529 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.27□□□□□ -1.89
CUX2O14529 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.27□□□□□ -1.89
CUX2O14529 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.27□□□□□ -1.89
CUX2O14529 AC021749.1-201ENST00000604322 607 ntBASIC3.27□□□□□ -1.89
CUX2O14529 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.27□□□□□ -1.89
CUX2O14529 AC123767.1-202ENST00000620407 817 ntBASIC3.27□□□□□ -1.89
CUX2O14529 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.27□□□□□ -1.89
CUX2O14529 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms