Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.86□□□□□ -1.95
NEDD8-MDP1E9PL57 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092593.1-201ENST00000515413 1815 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORA23-201ENST00000365128 182 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-809P-201ENST00000384461 107 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR196B-201ENST00000384852 84 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORD115.1-201ENST00000391109 76 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL360182.1-201ENST00000397433 468 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR887-201ENST00000401258 79 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 RNA5SP344-201ENST00000411081 104 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL390023.1-201ENST00000428836 262 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC104332.2-201ENST00000429959 156 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 MTND1P30-201ENST00000441241 901 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL592447.1-201ENST00000447592 540 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 SSXP4-201ENST00000451349 245 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL359385.1-201ENST00000456509 365 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 KC877373.1-201ENST00000479066 408 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC117522.3-201ENST00000507974 584 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 ERHP1-201ENST00000523006 310 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR3921-201ENST00000577308 85 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 COX6CP3-201ENST00000580869 223 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 TPMTP1-201ENST00000592307 737 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC105129.3-201ENST00000605455 485 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL031775.1-201ENST00000607014 887 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AL390240.1-201ENST00000612950 384 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 TUG1_2.1-201ENST00000614234 87 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC090132.2-201ENST00000615881 347 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC091931.1-201ENST00000623488 728 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 AC005832.2-201ENST00000538921 1430 ntBASIC2.85□□□□□ -1.95
NEDD8-MDP1E9PL57 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AP003122.5-201ENST00000527668 3766 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR449A-201ENST00000362113 91 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 RNU6-859P-201ENST00000362728 107 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 MIR493-201ENST00000385254 89 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 MT-TH-201ENST00000387441 69 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 NPM1P11-201ENST00000417106 855 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC018630.2-202ENST00000422992 927 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 CYCSP46-201ENST00000423569 204 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL35AP22-201ENST00000436855 335 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 COX6CP12-201ENST00000446748 202 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 RPL31P60-201ENST00000478450 367 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AP000797.1-201ENST00000478870 387 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 RPS15AP36-201ENST00000492022 382 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC010486.3-201ENST00000511602 785 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AF131216.2-201ENST00000512316 564 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 SNORA31.21-201ENST00000517180 77 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC025881.1-201ENST00000518851 512 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AP000907.2-201ENST00000530827 353 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC123904.2-201ENST00000548059 300 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF519P3-201ENST00000557158 1032 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC005951.2-201ENST00000576282 495 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 ZNF861P-201ENST00000588126 639 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC012065.4-201ENST00000602445 679 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AP002826.1-201ENST00000608835 315 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC131902.3-201ENST00000611767 581 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC009159.1-201ENST00000618386 642 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AC068057.2-201ENST00000624047 895 ntBASIC2.84□□□□□ -1.95
NEDD8-MDP1E9PL57 AL159972.1-201ENST00000625150 448 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms