Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 RPL21P104-201ENST00000464143 478 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC087190.1-201ENST00000484462 480 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNA5SP468-201ENST00000516782 93 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC109635.4-202ENST00000531666 412 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 MTCYBP27-201ENST00000555160 670 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC007229.1-201ENST00000590455 412 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RPL21P136-201ENST00000605378 396 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC016542.1-201ENST00000608259 493 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC090425.2-201ENST00000608818 501 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC109454.4-201ENST00000623411 649 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC087821.2-201ENST00000637086 450 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 NUP58P1-201ENST00000502546 1738 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-272P-201ENST00000411028 104 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 HMGB1P12-201ENST00000438594 598 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-488P-201ENST00000515918 99 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-27P-201ENST00000516146 107 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 RNU6-1102P-201ENST00000516149 96 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC023813.2-201ENST00000564321 469 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC068135.2-201ENST00000569293 1028 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 MIR5000-201ENST00000577717 103 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC008759.3-201ENST00000613300 508 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 uc_338.12-201ENST00000616344 181 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AL512427.1-201ENST00000618593 349 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC068880.4-201ENST00000623082 495 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC093875.1-201ENST00000623688 504 ntBASIC1.35□□□□□ -2.19
COL6A6A6NMZ7 AC130650.2-201ENST00000618736 2403 ntBASIC1.34□□□□□ -2.19
COL6A6A6NMZ7 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.34□□□□□ -2.19
COL6A6A6NMZ7 RNU6-251P-201ENST00000363235 104 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 RNU6-799P-201ENST00000363567 107 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AP002784.2-201ENST00000397300 549 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AL136372.1-201ENST00000403060 228 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 FCF1P2-201ENST00000415284 583 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 BEND7P1-201ENST00000422058 457 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AL691517.1-201ENST00000440833 1235 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 HMGN2P18-201ENST00000450680 270 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 MTCO3P2-201ENST00000457365 171 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 SYPL1P1-201ENST00000473622 768 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 HMGB1P38-201ENST00000490557 577 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 MTCO2P9-201ENST00000503214 694 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC006390.1-201ENST00000508068 283 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 RPPH1-2P-201ENST00000516688 293 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC087373.1-201ENST00000524920 491 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 MTCO3P15-201ENST00000526563 574 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 OR8K4P-201ENST00000534608 872 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC087894.1-201ENST00000538359 518 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 TRAV28-201ENST00000557548 323 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 MTATP6P2-201ENST00000603319 678 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC093838.1-201ENST00000613014 469 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC005332.6-201ENST00000613178 446 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 AC009318.4-201ENST00000620496 486 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 MTND4P8-201ENST00000514997 1362 ntBASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.34□□□□□ -2.2
COL6A6A6NMZ7 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 U8.1-201ENST00000362843 134 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 SNORD82-201ENST00000365530 70 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 SNORA40.4-201ENST00000390971 128 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 SFR1P1-201ENST00000403720 688 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC004022.2-201ENST00000413824 193 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL158050.1-201ENST00000416077 457 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RPS6P15-201ENST00000431996 751 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 MTND1P18-201ENST00000448191 573 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 RPS20P24-201ENST00000457473 361 ntBASIC1.33□□□□□ -2.2
COL6A6A6NMZ7 AC087879.1-201ENST00000474343 374 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms