Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 NEK4P1-201ENST00000433383 879 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 NDUFB4P6-201ENST00000436819 366 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 HMGN2P20-201ENST00000437531 273 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AL358832.1-201ENST00000497800 389 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 MTND2P33-201ENST00000506452 1031 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 HMGB1P41-201ENST00000520234 440 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC022880.1-201ENST00000534017 973 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC124947.2-202ENST00000552735 133 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 LRRC77P-213ENST00000637727 880 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
LRRC53A6NM62 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
LRRC53A6NM62 AC093908.1-201ENST00000623125 8092 ntBASIC3.41□□□□□ -1.86
LRRC53A6NM62 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.86
LRRC53A6NM62 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.4□□□□□ -1.86
LRRC53A6NM62 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
LRRC53A6NM62 RNU6-188P-201ENST00000364207 107 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNU1-33P-201ENST00000364249 162 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNY1P12-201ENST00000364251 105 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNU6-282P-201ENST00000365357 103 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNU6-1042P-201ENST00000384204 107 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 Y_RNA.582-201ENST00000391023 95 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNU6-1197P-201ENST00000391183 107 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AL513331.1-201ENST00000411908 397 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC104651.1-201ENST00000427559 735 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC092573.2-201ENST00000434546 243 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 NANOGNBP1-201ENST00000448444 480 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 UQCRHP3-201ENST00000451503 251 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 RNA5SP310-201ENST00000459084 116 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 SNORD97-201ENST00000459187 142 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC105252.1-201ENST00000503089 286 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 LAMTOR3P2-201ENST00000504479 232 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 CASP1P1-201ENST00000526345 212 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC53A6NM62 AL391840.1-201ENST00000571144 367 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 GLUD1P4-201ENST00000590914 418 ntBASIC3.4□□□□□ -1.87
LRRC53A6NM62 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC53A6NM62 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.4□□□□□ -1.87
LRRC53A6NM62 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
LRRC53A6NM62 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
LRRC53A6NM62 HSPE1P11-201ENST00000339579 310 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 RAC1P6-201ENST00000423911 575 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 TAAR7P-201ENST00000436141 242 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC009237.8-201ENST00000445492 379 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 SSXP4-201ENST00000451349 245 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 MTCYBP1-201ENST00000454315 1119 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC011825.1-201ENST00000484967 388 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 SCARNA24.1-201ENST00000516465 137 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 RNU7-51P-201ENST00000516560 62 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 RNU6-1092P-201ENST00000516955 87 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 RN7SKP258-201ENST00000517151 304 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC090572.1-201ENST00000519251 160 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AP006587.4-201ENST00000526053 529 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC002545.1-201ENST00000592511 181 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AP002360.4-201ENST00000606980 481 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC009570.1-201ENST00000609599 745 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AL390240.1-201ENST00000612950 384 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.39□□□□□ -1.87
LRRC53A6NM62 AC092447.7-201ENST00000422212 1621 ntBASIC3.39□□□□□ -1.87
LRRC53A6NM62 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms