Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC074029.2-201ENST00000551045 634 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC096586.2-201ENST00000610260 441 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.12□□□□□ -2.23
CNOT1A5YKK6 AC111188.2-201ENST00000529697 1387 ntBASIC1.12□□□□□ -2.23
CNOT1A5YKK6 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AL034374.1-201ENST00000406329 351 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AL513343.1-201ENST00000451818 792 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 BTF3P12-201ENST00000519620 469 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC020923.1-201ENST00000624021 917 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 DPPA3P1-201ENST00000448050 469 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 RNA5SP233-201ENST00000459153 113 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC105252.1-201ENST00000503089 286 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC110792.2-201ENST00000510278 224 ntBASIC1.11□□□□□ -2.23
CNOT1A5YKK6 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.11□□□□□ -2.23
CNOT1A5YKK6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RPL23AP33-201ENST00000442301 452 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 PMCHL2-203ENST00000457791 237 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RPL23AP41-201ENST00000484754 458 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RNA5SP384-201ENST00000516615 116 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 CENPUP2-201ENST00000555897 1186 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC126177.8-201ENST00000618339 1015 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RNU11-5P-201ENST00000391216 129 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 SSXP10-201ENST00000402595 565 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 PSMA2P3-201ENST00000429685 675 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 HNRNPDLP3-201ENST00000456745 380 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RNU7-26P-201ENST00000458980 63 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RPS27AP10-201ENST00000496103 208 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 MTND5P9-201ENST00000503854 1755 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AK3P2-201ENST00000507976 429 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RNU6-1073P-201ENST00000517182 106 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 ANP32BP3-201ENST00000559213 706 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC022662.1-201ENST00000580252 331 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AC211469.2-201ENST00000605461 205 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 MIR8087-201ENST00000612745 78 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 AL445493.3-201ENST00000619568 477 ntBASIC1.1□□□□□ -2.23
CNOT1A5YKK6 RNU6-670P-201ENST00000364312 104 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AL031183.1-201ENST00000457667 207 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 RPL9P9-202ENST00000466501 579 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AL135752.1-201ENST00000479477 471 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AP003072.2-201ENST00000527756 676 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AC010928.2-201ENST00000588017 287 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 VN1R107P-201ENST00000601784 209 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AL031775.1-201ENST00000607014 887 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 AC108706.1-201ENST00000611053 297 ntBASIC1.09□□□□□ -2.23
CNOT1A5YKK6 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.09□□□□□ -2.23
CNOT1A5YKK6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.09□□□□□ -2.24
CNOT1A5YKK6 AC080100.1-201ENST00000624239 5356 ntBASIC1.09□□□□□ -2.24
CNOT1A5YKK6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC023824.2-201ENST00000566185 400 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC004808.1-201ENST00000627671 721 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 SNORD114-23-201ENST00000363536 72 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC016691.1-201ENST00000441321 413 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 SNORD121B-201ENST00000458838 81 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC105914.1-201ENST00000511798 226 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AP003717.3-201ENST00000544832 1180 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AC090616.5-202ENST00000582111 297 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 MIR4658-201ENST00000584344 65 ntBASIC1.08□□□□□ -2.24
CNOT1A5YKK6 AP003117.1-201ENST00000602771 554 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms