Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 EEF1B2P4-201ENST00000551398 348 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 MIMT1-201ENST00000597105 1050 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AL773524.1-201ENST00000614065 229 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC021755.4-201ENST00000616620 456 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 AC025263.3-201ENST00000622965 1396 ntBASIC1.21□□□□□ -2.22
TCRBV3S1A0A5B6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-1155P-201ENST00000363554 107 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-921P-201ENST00000384361 107 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 MIR649-201ENST00000384843 97 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RNA5SP450-201ENST00000411206 102 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RPP40P1-201ENST00000426762 456 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 HMGB1P31-201ENST00000437242 427 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC118469.1-201ENST00000442943 488 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RNU1-123P-201ENST00000458950 160 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AL049714.1-201ENST00000466686 347 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC104164.3-201ENST00000467363 1258 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC023813.2-201ENST00000564321 469 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 MIR3921-201ENST00000577308 85 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 RMST_6.1-201ENST00000611980 203 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC090132.2-201ENST00000615881 347 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC068722.2-201ENST00000618734 544 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC091953.2-201ENST00000623979 160 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AC068057.2-201ENST00000624047 895 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AP003400.5-201ENST00000624827 617 ntBASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
TCRBV3S1A0A5B6 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 DEFB108F-201ENST00000344638 222 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 U8.2-201ENST00000363156 134 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-891P-201ENST00000384280 111 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 RSL24D1P4-201ENST00000400938 484 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 MICF-203ENST00000432679 129 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 MTND1P33-201ENST00000446251 917 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC027575.1-201ENST00000481064 460 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 RPS15AP36-201ENST00000492022 382 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AP000926.3-201ENST00000497201 299 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC098862.1-201ENST00000504991 413 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC109464.2-201ENST00000510242 943 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-1282P-201ENST00000516735 96 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 DEFB108D-201ENST00000527787 222 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC004217.3-201ENST00000551552 878 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC011611.5-201ENST00000552477 578 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 MTCYBP27-201ENST00000555160 670 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 MIR4435-1-201ENST00000582552 80 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AL645939.4-201ENST00000604495 135 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC097504.2-201ENST00000608088 454 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC021851.1-201ENST00000608537 1082 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC091925.2-201ENST00000625059 256 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 AC025048.6-202ENST00000627667 438 ntBASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
TCRBV3S1A0A5B6 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-882P-201ENST00000391025 103 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL035405.1-201ENST00000400795 710 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL589655.1-201ENST00000405398 482 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 SNORA11-201ENST00000408789 128 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-174P-201ENST00000410406 106 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 RNU2-41P-201ENST00000410991 178 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 OR51A5P-201ENST00000415429 942 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL158823.1-201ENST00000418441 478 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AC244636.1-201ENST00000421152 228 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 TAAR7P-201ENST00000436141 242 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 AL359273.1-201ENST00000510918 627 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 RNU6-27P-201ENST00000516146 107 ntBASIC1.18□□□□□ -2.22
TCRBV3S1A0A5B6 OR5AK1P-201ENST00000524837 922 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms