Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AP001429.1-201ENST00000602568 530 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AL583856.2-201ENST00000606298 543 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC080013.4-201ENST00000607624 649 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AC004067.1-201ENST00000608733 700 ntBASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
TRAV41A0A0B4J266 CKAP2P1-201ENST00000555477 2049 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-217P-201ENST00000384164 104 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 SNORA67.3-201ENST00000384366 140 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 RNU6-1328P-201ENST00000410938 106 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL356379.1-201ENST00000414105 126 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC018630.2-202ENST00000422992 927 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 PPP1R11P2-201ENST00000423543 382 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 Z98742.2-201ENST00000431564 187 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 SDR42E1P3-201ENST00000438345 502 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 BNIP3P2-201ENST00000441221 577 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 OFD1P3Y-201ENST00000453312 783 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 RPL30P9-201ENST00000465586 330 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC090453.1-201ENST00000495560 436 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC022447.3-201ENST00000506865 495 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 HSPE1P18-201ENST00000517602 280 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL132857.1-201ENST00000555180 708 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 MIR4637-201ENST00000582405 84 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL161729.4-201ENST00000604650 476 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL450336.1-201ENST00000605180 586 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 DUXAP10-204ENST00000612052 616 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL596245.1-201ENST00000618994 362 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL031601.2-202ENST00000622650 282 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL157770.1-201ENST00000623049 439 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AC110994.2-201ENST00000635481 492 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 MIR1322-201ENST00000638013 71 ntBASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV41A0A0B4J266 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL109809.4-201ENST00000603520 2185 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC005832.2-201ENST00000538921 1430 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 Y_RNA.25-201ENST00000362528 102 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HMGB1P17-201ENST00000403495 628 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL023284.1-201ENST00000403956 276 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HMGN2P38-201ENST00000423806 265 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HMGB1P9-201ENST00000429856 646 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 MICF-203ENST00000432679 129 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 SEPT7P5-201ENST00000434048 306 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC092427.1-201ENST00000439177 601 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 Z82210.1-201ENST00000440037 231 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 GPM6BP3-201ENST00000442797 145 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 OSTCP8-201ENST00000445117 448 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 MTCYBP11-201ENST00000447254 1109 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AP1S2P1-201ENST00000457344 379 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC090255.1-201ENST00000495779 349 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 RPS29P21-201ENST00000496272 170 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 RNU1-40P-201ENST00000516816 164 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 RNU1-97P-201ENST00000516872 164 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AP001189.2-201ENST00000527320 189 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HSPE1P3-201ENST00000559254 309 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC005951.2-201ENST00000576282 495 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 HMGN2P15-201ENST00000585707 270 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC009314.1-201ENST00000603871 304 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC025588.2-201ENST00000604851 466 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC008498.1-201ENST00000613012 531 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL161423.1-201ENST00000613700 262 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL118556.2-201ENST00000614375 824 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 MIR6130-201ENST00000619419 109 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC008443.7-201ENST00000622195 246 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AL356266.1-201ENST00000623311 483 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC087821.2-201ENST00000637086 450 ntBASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
TRAV41A0A0B4J266 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 AC092881.1-201ENST00000638218 2733 ntBASIC1.6□□□□□ -2.15
TRAV41A0A0B4J266 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms