Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 SNORD48-201ENST00000364953 64 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-883P-201ENST00000384597 107 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 MIR217-201ENST00000384817 110 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 MIR17-201ENST00000385012 84 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC023141.4-201ENST00000412031 328 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AL445685.2-201ENST00000422551 342 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC018630.2-202ENST00000422992 927 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 PSPHP1-201ENST00000450062 261 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 PPP1R2P5-201ENST00000457256 603 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 MRPS17P3-201ENST00000465453 385 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 LARP1BP2-201ENST00000486594 519 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 MTCO2P9-201ENST00000503214 694 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 HMGN2P15-201ENST00000585707 270 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AP001486.3-201ENST00000615334 372 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 AC131280.1-202ENST00000624067 4211 ntBASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
TRAV3A0A0B4J244 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-750P-201ENST00000390946 107 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC019129.1-201ENST00000403786 261 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 GSTA9P-201ENST00000406231 611 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL450338.1-201ENST00000407987 512 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL136133.1-201ENST00000413694 376 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC008173.1-201ENST00000418901 264 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 PPP1R11P2-201ENST00000423543 382 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 TOMM20P4-201ENST00000427861 435 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 HMGB1P9-201ENST00000429856 646 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 TRIM60P13-201ENST00000432350 1283 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 OSTCP8-201ENST00000445117 448 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 KLF3P2-201ENST00000465138 268 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 DYNLL1P5-201ENST00000467158 270 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 RPL23AP42-201ENST00000471152 471 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC108729.2-201ENST00000476543 840 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 RNU1-41P-201ENST00000516161 162 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 RNU1-48P-201ENST00000516400 162 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-1256P-201ENST00000516539 103 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 EEF1A1P37-201ENST00000522748 715 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 BNIP3P24-201ENST00000593398 557 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL158827.2-201ENST00000602494 330 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 KATNBL1P5-201ENST00000605015 517 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC091946.2-201ENST00000606105 291 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL450270.1-201ENST00000606160 391 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL589743.7-201ENST00000612637 233 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC068057.2-201ENST00000624047 895 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 AL691447.3-201ENST00000635020 330 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 MTND5P29-201ENST00000458676 1807 ntBASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TRAV3A0A0B4J244 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-741P-201ENST00000383889 107 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-932P-201ENST00000391108 106 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-1140P-201ENST00000410517 106 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 RNU6-575P-201ENST00000411326 105 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AL030996.1-201ENST00000411430 235 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AL158050.1-201ENST00000416077 457 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC096649.2-201ENST00000416186 393 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 ZNF90P2-204ENST00000419323 1075 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC007742.1-201ENST00000425789 329 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 ELOCP26-201ENST00000436067 329 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 THAP5P1-201ENST00000439089 262 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC010095.1-201ENST00000443543 144 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 TPT1P14-201ENST00000448018 505 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 snoU13.15-201ENST00000459407 104 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 BOLA3P3-201ENST00000505182 232 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC022447.3-201ENST00000506865 495 ntBASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
TRAV3A0A0B4J244 AC090502.2-201ENST00000549267 280 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms