Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 HGF-207ENST00000453018 721 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 FAM92A1P2-202ENST00000504766 877 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC112518.2-201ENST00000508565 425 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 RNU6-1282P-201ENST00000516735 96 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 RNU6-295P-201ENST00000516901 104 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 snoZ278.1-201ENST00000517059 112 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC010186.2-204ENST00000537668 439 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC087465.1-201ENST00000560574 245 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC011494.1-201ENST00000596454 237 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AL355297.2-201ENST00000604792 129 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC096586.1-201ENST00000610267 561 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC013412.1-201ENST00000610687 192 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC091834.1-201ENST00000614543 472 ntBASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
TRAV27A0A087WT01 AC103710.2-202ENST00000641454 2853 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AL049641.1-201ENST00000441055 1948 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 SNORA51.6-201ENST00000384151 125 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 SNORD56-201ENST00000413522 71 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 BX510359.4-201ENST00000423750 193 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AIMP1P2-201ENST00000425294 312 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 HMGN2P3-201ENST00000433603 273 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 HMGN2P5-201ENST00000436882 273 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 HMGB3P12-201ENST00000438745 556 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 BMI1P1-201ENST00000445879 941 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AL500527.1-201ENST00000448532 255 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 NDUFA5P7-201ENST00000452914 242 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 RPL7P18-201ENST00000478965 734 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 SNORA25.15-201ENST00000516487 89 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 TRAV11-201ENST00000539512 339 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 CR383656.7-201ENST00000548164 174 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AL391261.3-201ENST00000557194 520 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC005034.5-201ENST00000604219 466 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 uc_338.5-201ENST00000611839 155 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AP006437.1-201ENST00000641440 3685 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 AC008555.8-201ENST00000623602 2168 ntBASIC1.41□□□□□ -2.18
TRAV27A0A087WT01 GDI2P1-201ENST00000429312 1336 ntBASIC1.4□□□□□ -2.18
TRAV27A0A087WT01 OR4G11P-202ENST00000642116 1414 ntBASIC1.4□□□□□ -2.18
TRAV27A0A087WT01 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
TRAV27A0A087WT01 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 SNORD115-48-201ENST00000364764 76 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 RNU1-148P-201ENST00000384472 162 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC016769.3-201ENST00000396562 315 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 SNRPEP2-201ENST00000397592 279 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC093106.2-201ENST00000428212 385 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC093422.3-201ENST00000428506 305 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 ZNF965P-201ENST00000432501 817 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 LARP1BP2-201ENST00000486594 519 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AL049874.1-201ENST00000489560 388 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AP005435.4-201ENST00000529514 284 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 SETP7-201ENST00000552169 453 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC025918.2-201ENST00000558683 763 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC093510.2-201ENST00000562820 896 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 MIR4529-201ENST00000578110 78 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 BPTFP1-201ENST00000579209 492 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AL031176.1-201ENST00000604554 466 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 BX248123.2-201ENST00000606318 124 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AL355802.4-201ENST00000607635 548 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 VN1R9P-201ENST00000614184 867 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 AC026634.1-201ENST00000634369 198 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 MTCO1P23-201ENST00000415223 1526 ntBASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.4□□□□□ -2.19
TRAV27A0A087WT01 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 RNU5A-1-201ENST00000362698 116 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 RNU2-49P-201ENST00000410666 184 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 BOLA3P4-201ENST00000418151 400 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AL590383.1-201ENST00000428602 75 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AL512637.2-201ENST00000431287 1256 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AL353689.1-201ENST00000438895 199 ntBASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.39□□□□□ -2.19
TRAV27A0A087WT01 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.39□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms