Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC007389.2-201ENST00000434630 306 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 FABP5P14-201ENST00000437273 393 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 NDUFA5P12-201ENST00000503796 343 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC093767.1-201ENST00000504523 156 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC006499.5-201ENST00000505037 514 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 SCARNA15.2-201ENST00000516409 127 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AL356432.3-201ENST00000568952 465 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 MTCYBP22-201ENST00000603788 447 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC093732.2-201ENST00000607950 274 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 DUXAP10-204ENST00000612052 616 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 MIR6817-201ENST00000615588 66 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 MIR6873-201ENST00000622788 63 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AC007998.5-201ENST00000622938 237 ntBASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
LINC01558Q9Y6Z2 MTND5P6-201ENST00000422338 1798 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 RNA5SP240-201ENST00000365355 128 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 MIR421-201ENST00000365696 85 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL449283.1-202ENST00000418249 604 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL513185.2-201ENST00000425543 193 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC063976.3-201ENST00000426849 329 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 TRIM60P9Y-201ENST00000438459 816 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 THAP5P1-201ENST00000439089 262 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 TRIM60P11Y-201ENST00000445313 801 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 MTND1P33-201ENST00000446251 917 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC092685.1-201ENST00000447960 1243 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL133547.1-201ENST00000448546 220 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL590365.1-201ENST00000450788 243 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 USP9YP10-201ENST00000454868 628 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC069528.1-202ENST00000482888 637 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC132942.1-201ENST00000486753 483 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL049874.1-201ENST00000489560 388 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC097462.2-201ENST00000504623 481 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 RNA5SP341-201ENST00000516261 117 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 HIGD1AP6-201ENST00000521833 279 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC113192.3-201ENST00000529152 742 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC019288.1-201ENST00000557918 224 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 MIR4422-201ENST00000581938 83 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC104763.2-201ENST00000604179 382 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 SDR42E1P1-201ENST00000611327 477 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC006338.2-201ENST00000616864 791 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AC039056.2-201ENST00000622261 511 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 AL118508.4-201ENST00000624142 1176 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 MIR219B-201ENST00000637023 88 ntBASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.7□□□□□ -2.3
LINC01558Q9Y6Z2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AC005539.1-201ENST00000443768 1479 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 MIR9-3-201ENST00000385084 90 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 MIR514A1-201ENST00000385133 98 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL023284.1-201ENST00000403956 276 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 RNU2-2P-201ENST00000410396 191 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 OR51A5P-201ENST00000415429 942 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 PAICSP7-201ENST00000419829 962 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL358453.1-201ENST00000422522 250 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 PNRC2P1-201ENST00000423940 420 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 ZNF863P-201ENST00000426746 417 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL512637.2-201ENST00000431287 1256 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 USP9YP35-201ENST00000435696 412 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AL354941.1-201ENST00000438600 464 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 APOA2-205ENST00000468465 421 ntTSL 2 BASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 RPS29P22-201ENST00000472363 168 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 HSPE1P6-201ENST00000479457 291 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 CKS1BP2-201ENST00000497342 240 ntBASIC0.69□□□□□ -2.3
LINC01558Q9Y6Z2 AC109471.1-201ENST00000511631 612 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms