Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 AC245054.1-201ENST00000420944 258 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 COX6B1P7-201ENST00000430845 235 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC104058.1-201ENST00000448028 297 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 ELOCP23-201ENST00000452014 332 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 SNORA84-201ENST00000459229 133 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RPL31P60-201ENST00000478450 367 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC079140.5-201ENST00000507882 310 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RBBP4P6-201ENST00000508098 202 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC098799.2-201ENST00000509466 868 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MEPE-206ENST00000511670 550 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC010486.1-201ENST00000511793 424 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 APOOP4-201ENST00000513530 597 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 RNU6-1256P-201ENST00000516539 103 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC106782.4-201ENST00000568264 210 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR4286-201ENST00000580651 93 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC011712.1-201ENST00000588959 234 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC106900.2-201ENST00000604994 317 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AC063943.3-201ENST00000615562 356 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 AP005264.7-201ENST00000625003 745 ntBASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
PCDHGA3Q9Y5H0 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA3Q9Y5H0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.09□□□□□ -1.76
PCDHGA3Q9Y5H0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP307-201ENST00000362863 116 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-1167P-201ENST00000363227 94 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 Y_RNA.303-201ENST00000364998 94 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP283-201ENST00000365604 119 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU1-63P-201ENST00000383902 164 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-116P-201ENST00000384042 109 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU4-26P-201ENST00000410270 107 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RPS20P14-201ENST00000412545 360 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC008264.1-201ENST00000447612 367 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL23AP81-201ENST00000455252 467 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RPL21P99-201ENST00000480369 423 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC104164.2-201ENST00000496953 495 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 FTH1P9-201ENST00000513251 355 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU1-61P-201ENST00000516107 151 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNA5SP519-201ENST00000516480 119 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RANP9-201ENST00000519957 271 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 SUMO2P20-201ENST00000520803 283 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC005730.3-201ENST00000583067 366 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR4424-201ENST00000585257 86 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU4-89P-201ENST00000607443 133 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AL357078.3-201ENST00000607528 618 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 AL390240.1-201ENST00000612950 384 ntBASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
PCDHGA3Q9Y5H0 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 UBE2L2-201ENST00000254302 429 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 Y_RNA.86-201ENST00000363020 111 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-38P-201ENST00000384085 107 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR514A2-201ENST00000385131 88 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 MIR514A3-201ENST00000385132 88 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 TAAR7P-201ENST00000436141 242 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 RNU6-333P-201ENST00000459117 107 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AP002812.1-201ENST00000495378 474 ntBASIC4.07□□□□□ -1.76
PCDHGA3Q9Y5H0 AC104136.1-201ENST00000512969 394 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms