Protein–RNA interactions for Protein: Q9Y3Y2

CHTOP, Chromatin target of PRMT1 protein, humanhuman

Known RBP Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOPQ9Y3Y2 AC090079.2-201ENST00000575289 768 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 MIR3160-1-201ENST00000577972 85 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 MIR4448-201ENST00000584360 86 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 NRBF2P1-201ENST00000587407 859 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AL606834.2-201ENST00000602954 668 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AL109918.3-201ENST00000603072 338 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 APOOP1-201ENST00000604695 592 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AC107294.1-201ENST00000609524 467 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AL512506.1-201ENST00000613918 449 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AC068880.4-201ENST00000623082 495 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AL390862.1-201ENST00000635467 1469 ntBASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.05□□□□□ -2.08
CHTOPQ9Y3Y2 AC005336.3-201ENST00000623833 2679 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL356432.1-201ENST00000405809 419 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 RPL21P24-201ENST00000413752 448 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 WARS2P1-201ENST00000429678 537 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC244035.1-201ENST00000430042 390 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 RPL23AP6-201ENST00000446637 472 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC016696.1-201ENST00000446949 318 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC018437.1-201ENST00000492214 406 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC025755.1-201ENST00000521306 278 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 NCAPGP2-201ENST00000557911 754 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL035425.3-201ENST00000564206 4996 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL512347.1-201ENST00000566420 503 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL031274.2-201ENST00000599419 203 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC098826.3-201ENST00000603823 466 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AC007938.3-201ENST00000604965 623 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AF129408.1-201ENST00000608767 431 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 AL109620.1-201ENST00000618738 1197 ntBASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.04□□□□□ -2.08
CHTOPQ9Y3Y2 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC073325.2-201ENST00000339545 159 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 RNA5SP276-201ENST00000362580 94 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 NDUFS5P1-201ENST00000405668 289 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 RN7SKP159-201ENST00000410657 292 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 HMGB3P2-201ENST00000411913 584 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC063979.1-201ENST00000415539 377 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL160275.3-201ENST00000423876 471 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 HMGB1P27-201ENST00000431429 603 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL050321.1-201ENST00000432363 400 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 MRPL50P4-201ENST00000446432 475 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC108043.1-201ENST00000512696 574 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 MTND4LP31-201ENST00000514859 294 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 RNU6-1028P-201ENST00000517164 93 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC021451.1-201ENST00000523498 1129 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 LINC00933-203ENST00000559812 219 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC106785.1-201ENST00000565935 262 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC126365.2-201ENST00000580630 379 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC243960.4-201ENST00000600532 288 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AL161798.1-201ENST00000604630 131 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 AC091953.5-201ENST00000622919 233 ntBASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHTOPQ9Y3Y2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.03□□□□□ -2.09
CHTOPQ9Y3Y2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
CHTOPQ9Y3Y2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 snoZ40.1-201ENST00000364540 72 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 RNU6-744P-201ENST00000365557 107 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 RNU6-1316P-201ENST00000384242 108 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 SNORA40.19-201ENST00000390846 128 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 AL590084.1-201ENST00000407885 387 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 HSFY4P-201ENST00000415994 1181 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 AL445584.1-201ENST00000431451 330 ntBASIC2.02□□□□□ -2.09
CHTOPQ9Y3Y2 AL161788.1-201ENST00000441805 169 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms