Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 RNU6-920P-201ENST00000410926 92 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC023141.4-201ENST00000412031 328 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 MTATP6P27-201ENST00000416987 621 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 MTCYBP15-201ENST00000433123 1127 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AL158053.1-201ENST00000441503 453 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RPL39P6-201ENST00000448289 150 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 MRPL42P4-201ENST00000453267 443 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 OFD1P3Y-201ENST00000453312 783 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC097493.1-201ENST00000463958 372 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC090515.1-201ENST00000465295 476 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RNU1-40P-201ENST00000516816 164 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RNU1-97P-201ENST00000516872 164 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6-1261P-201ENST00000517194 104 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AP001542.2-201ENST00000593141 364 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC009314.1-201ENST00000603871 304 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC012467.1-201ENST00000607740 256 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AL356266.1-201ENST00000623311 483 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 AC068057.2-201ENST00000624047 895 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 MTND4P27-201ENST00000450813 1354 ntBASIC1.85□□□□□ -2.11
HDGFL3Q9Y3E1 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AL109809.4-201ENST00000603520 2185 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 HSPE1P11-201ENST00000339579 310 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 U8.2-201ENST00000363156 134 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 SNORA70B-201ENST00000384210 135 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 HMGB1P49-201ENST00000418882 569 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC007560.1-201ENST00000426912 237 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 Z80107.1-201ENST00000436830 412 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 OR10R1P-201ENST00000441524 1141 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AL353718.1-201ENST00000451028 517 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 MTND2P24-201ENST00000453434 806 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 ANKRD26P4-201ENST00000455755 950 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 RNU6-528P-201ENST00000516926 100 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 IGKV3-31-201ENST00000523109 329 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC118942.1-201ENST00000529674 1035 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC044913.1-201ENST00000557200 430 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 MIR4648-201ENST00000580107 72 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 OR4K7P-201ENST00000580232 945 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 MIR4637-201ENST00000582405 84 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC090330.1-201ENST00000588646 764 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 SNORD14A-201ENST00000606526 91 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AL449363.1-201ENST00000617815 186 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 AC008443.7-201ENST00000622195 246 ntBASIC1.84□□□□□ -2.11
HDGFL3Q9Y3E1 ZNF355P-201ENST00000427301 3216 ntBASIC1.84□□□□□ -2.12
HDGFL3Q9Y3E1 MTND4P35-201ENST00000604257 1375 ntBASIC1.84□□□□□ -2.12
HDGFL3Q9Y3E1 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 SNORA3A-201ENST00000364113 130 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 SNRPEP2-201ENST00000397592 279 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AL109755.1-201ENST00000401791 649 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 Z98742.2-201ENST00000431564 187 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AL445646.1-201ENST00000431784 216 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 MTCYBP45-201ENST00000435243 565 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 ARF4P4-201ENST00000439608 520 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 RPL32P28-201ENST00000443577 397 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AL021397.1-201ENST00000451806 248 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 TRBV12-1-201ENST00000479785 344 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 OR4G11P-201ENST00000492842 939 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC022447.1-201ENST00000515358 464 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC021749.1-201ENST00000604322 607 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC103710.1-201ENST00000610003 901 ntBASIC1.83□□□□□ -2.12
HDGFL3Q9Y3E1 AC010975.3-201ENST00000618727 978 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms