Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RNU5A-8P-201ENST00000364102 114 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-461P-201ENST00000364195 107 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 MIR554-201ENST00000384874 96 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 SNORA57.1-201ENST00000391227 145 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AL139397.2-201ENST00000404529 772 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC013410.2-201ENST00000422627 201 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 VN1R34P-201ENST00000447387 883 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 PRDX3P3-201ENST00000447765 522 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 RPL23AP41-201ENST00000484754 458 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC020699.1-201ENST00000505161 445 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC117522.3-201ENST00000507974 584 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 PRELID3BP5-201ENST00000508612 460 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 TPT1P8-201ENST00000510120 555 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 SCGB1D5P-201ENST00000515134 247 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 SCARNA13-201ENST00000516672 275 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-64P-201ENST00000517119 105 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC061975.8-201ENST00000587058 721 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 BNIP3P40-201ENST00000596017 556 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC004805.2-201ENST00000605382 482 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC091965.4-201ENST00000607691 587 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AC103710.1-201ENST00000610003 901 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 AP002782.1-201ENST00000623107 614 ntBASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
KCNIP3Q9Y2W7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC096644.4-201ENST00000563417 2912 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 SNORA63.1-201ENST00000362493 131 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-1167P-201ENST00000363227 94 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 SNORD113-6-201ENST00000363345 75 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 NDUFS5P4-201ENST00000412983 318 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL008987.1-201ENST00000415528 237 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 BPY2DP-201ENST00000422208 265 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL022400.1-201ENST00000423946 935 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 RPL7P36-201ENST00000444633 681 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 SNORD11.1-201ENST00000459482 85 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 RPS27AP10-201ENST00000496103 208 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC090136.1-201ENST00000520009 240 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 DEFB108A-201ENST00000530110 222 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AP000907.2-201ENST00000530827 353 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC024220.1-201ENST00000603675 484 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 DPPA3P3-201ENST00000603842 430 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC012468.1-201ENST00000604888 430 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC107952.2-201ENST00000606048 486 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL355472.4-201ENST00000610233 626 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AL136295.6-201ENST00000610486 658 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 MIR6895-201ENST00000613497 78 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC034102.8-201ENST00000615146 484 ntBASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
KCNIP3Q9Y2W7 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC000403.1-201ENST00000613696 3585 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL355596.1-201ENST00000565399 3996 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AL391994.1-201ENST00000254724 282 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-778P-201ENST00000363269 103 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-1284P-201ENST00000363701 100 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 Y_RNA.302-201ENST00000364997 102 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 MIR200C-201ENST00000384980 68 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 RNU6-750P-201ENST00000390946 107 ntBASIC2.28□□□□□ -2.04
KCNIP3Q9Y2W7 AC119751.3-201ENST00000399720 670 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms