Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 RNU2-58P-201ENST00000516403 183 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 SNORA20.3-201ENST00000516880 132 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 RNU6-1092P-201ENST00000516955 87 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 SNORA31.20-201ENST00000517111 133 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 CYCSP30-201ENST00000546447 172 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC037471.2-201ENST00000564941 598 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC034105.3-201ENST00000565294 442 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC012182.1-201ENST00000570133 895 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC024619.4-201ENST00000580924 316 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 MIR4775-201ENST00000581168 75 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC060780.3-201ENST00000589464 80 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 BNIP3P30-201ENST00000601184 574 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL022099.1-201ENST00000604551 712 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL035413.2-201ENST00000604801 525 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 MIR6868-201ENST00000611215 58 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC092794.2-201ENST00000620933 563 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 YWHAEP7-203ENST00000622054 312 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AL133383.2-201ENST00000622958 2336 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 ZNF285B-201ENST00000561698 1767 ntBASIC3.73□□□□□ -1.81
VPS4AQ9UN37 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS4AQ9UN37 AC004972.1-201ENST00000623934 2209 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC004925.1-201ENST00000624256 2706 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 RNA5SP399-201ENST00000364003 117 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SNORA23-201ENST00000365128 182 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 Y_RNA.381-201ENST00000365666 102 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 U1.1-201ENST00000384101 164 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 RNU2-39P-201ENST00000410604 198 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 MTCO3P12-201ENST00000416718 547 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC091286.1-201ENST00000431233 461 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 NEK4P1-201ENST00000433383 879 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SEPT14P3-201ENST00000439401 183 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AL121871.1-201ENST00000443413 436 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 RANP8-201ENST00000444720 713 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AL732372.2-207ENST00000445840 183 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 RPS11P1-201ENST00000451072 473 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SEPT14P2-201ENST00000453405 183 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 GMFBP1-201ENST00000467831 427 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 RPL31P13-201ENST00000484151 370 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 BTF3L4P4-201ENST00000506381 449 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 SEPT14P4-201ENST00000513445 186 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 FO082796.1-201ENST00000523795 183 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AL121579.1-201ENST00000555129 305 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 MIR3200-201ENST00000580767 85 ntBASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS4AQ9UN37 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
VPS4AQ9UN37 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 RPL7P26-201ENST00000333817 754 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 Y_RNA.111-201ENST00000363248 100 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 SNORA7.2-201ENST00000364446 145 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 Y_RNA.255-201ENST00000364581 97 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 RNA5SP235-201ENST00000365411 114 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 RNU6-877P-201ENST00000383868 107 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 RNU6-1074P-201ENST00000383995 104 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 HLFP1-201ENST00000402375 499 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AL354719.1-201ENST00000406535 843 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 RNU2-37P-201ENST00000410695 177 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AC068533.1-201ENST00000418542 415 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 DUTP6-201ENST00000425573 462 ntBASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS4AQ9UN37 ARF4P2-201ENST00000430209 526 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms