Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 MTATP6P14-201ENST00000455189 673 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AL049829.1-201ENST00000465411 156 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AC128713.1-201ENST00000471495 306 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AC021146.8-201ENST00000507455 733 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AP003122.3-201ENST00000526316 255 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AL512310.1-201ENST00000548639 172 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 MIR4435-1-201ENST00000582552 80 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC2.59□□□□□ -1.99
CDH9Q9ULB4 MTND3P19-201ENST00000603825 345 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AP000787.2-201ENST00000604432 568 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 MTND1P37-201ENST00000636562 264 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 AC010149.2-201ENST00000637608 315 ntBASIC2.59□□□□□ -1.99
CDH9Q9ULB4 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
CDH9Q9ULB4 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.59□□□□□ -2
CDH9Q9ULB4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
CDH9Q9ULB4 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDH9Q9ULB4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.58□□□□□ -2
CDH9Q9ULB4 XGY1-201ENST00000381172 446 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AL162578.1-201ENST00000406202 378 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AL358075.3-201ENST00000426289 226 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 ZNF863P-201ENST00000426746 417 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPS25P9-201ENST00000435591 252 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPL35AP22-201ENST00000436855 335 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 OR10R1P-201ENST00000441524 1141 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPL7P36-201ENST00000444633 681 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPS15AP27-201ENST00000449183 343 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 PAXBP1P1-201ENST00000449315 447 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 snoU109.3-201ENST00000459477 145 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC005410.1-202ENST00000460347 485 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPL23AP70-201ENST00000483361 460 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RPL36AP51-201ENST00000487216 318 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC108729.1-201ENST00000487812 947 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.58□□□□□ -2
CDH9Q9ULB4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.58□□□□□ -2
CDH9Q9ULB4 SUMO2P6-201ENST00000505273 288 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC234781.5-201ENST00000508429 271 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC116353.3-201ENST00000511215 249 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.58□□□□□ -2
CDH9Q9ULB4 SUB1P1-201ENST00000524415 382 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
CDH9Q9ULB4 OR5BN1P-201ENST00000532955 829 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.58□□□□□ -2
CDH9Q9ULB4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.58□□□□□ -2
CDH9Q9ULB4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.58□□□□□ -2
CDH9Q9ULB4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.58□□□□□ -2
CDH9Q9ULB4 MTCYBP23-201ENST00000558717 1102 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.58□□□□□ -2
CDH9Q9ULB4 AC087465.1-201ENST00000560574 245 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC023813.2-201ENST00000564321 469 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.58□□□□□ -2
CDH9Q9ULB4 AC103810.1-201ENST00000579873 453 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC005498.1-201ENST00000592125 465 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC024560.3-201ENST00000608482 349 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AL121652.1-201ENST00000608851 448 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 TUG1_2.1-201ENST00000614234 87 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC010133.1-201ENST00000615809 842 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 MIR1291-201ENST00000627649 87 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AC099063.3-201ENST00000642066 185 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.58□□□□□ -2
CDH9Q9ULB4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.58□□□□□ -2
CDH9Q9ULB4 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
CDH9Q9ULB4 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDH9Q9ULB4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 RNU6-432P-201ENST00000384196 109 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 RNU6-140P-201ENST00000384566 108 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 SNORA41-201ENST00000384675 132 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 U3.20-201ENST00000390909 217 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 TXNP7-201ENST00000406296 293 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AL451054.2-201ENST00000420896 202 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 NANOGP5-201ENST00000424456 877 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC098614.2-201ENST00000426040 255 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 SUMO1P4-201ENST00000429430 302 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC009961.3-201ENST00000449832 765 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.57□□□□□ -2
CDH9Q9ULB4 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.57□□□□□ -2
CDH9Q9ULB4 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC135721.1-201ENST00000497954 479 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC113155.1-201ENST00000511141 769 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 MRPS36P2-201ENST00000512569 299 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 RNA5SP24-201ENST00000516478 95 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 SNORA31.15-201ENST00000516771 132 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 RNA5SP471-201ENST00000516971 106 ntBASIC2.57□□□□□ -2
CDH9Q9ULB4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.57□□□□□ -2
CDH9Q9ULB4 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms