Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 RAP1BP2-201ENST00000478270 544 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC114781.4-201ENST00000513707 639 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 CYCSP2-201ENST00000558168 301 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC090888.1-201ENST00000561335 1141 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC011260.1-201ENST00000578420 472 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL353997.4-201ENST00000586196 166 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC105224.1-201ENST00000587055 421 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC020895.1-201ENST00000595362 272 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC068790.2-201ENST00000602601 557 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL360219.1-201ENST00000610230 366 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC002550.2-201ENST00000621246 394 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 AC092608.2-201ENST00000624427 218 ntBASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.12□□□□□ -1.91
CLIP2Q9UDT6 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 RNA5SP68-201ENST00000363885 119 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 RPS3AP24-201ENST00000407896 734 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 MIR1284-201ENST00000408337 120 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 MIR1290-201ENST00000408735 78 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AL953862.1-201ENST00000423016 168 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 DLGAP5P1-201ENST00000430307 464 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 ATP5F1P1-201ENST00000433775 569 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 NDUFB4P6-201ENST00000436819 366 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 RPL26P6-201ENST00000440913 438 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 FGF7P5-201ENST00000441829 291 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 KATNBL1P3-201ENST00000443475 909 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 ST13P20-201ENST00000447996 1065 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC092798.1-201ENST00000458542 409 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 SNORD121B-201ENST00000458838 81 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 snoU13.8-201ENST00000458890 104 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 RPS3AP22-201ENST00000488297 769 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC109464.2-201ENST00000510242 943 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AL359273.1-201ENST00000510918 627 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC117532.1-201ENST00000514638 323 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 RNU6-528P-201ENST00000516926 100 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC004486.1-201ENST00000546846 233 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC011451.2-201ENST00000604303 598 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC131235.4-201ENST00000609288 620 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 AC008568.2-201ENST00000623862 2313 ntBASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CLIP2Q9UDT6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AL672167.1-206ENST00000356293 943 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 RNU4-75P-201ENST00000364621 146 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 RNU6-1180P-201ENST00000364935 107 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 RNU6-636P-201ENST00000384598 107 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 SNORD116-4-201ENST00000384733 96 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 BTF3L4P1-201ENST00000413813 468 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 UBE2D3P1-201ENST00000436669 444 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 MTND2P4-201ENST00000445034 1004 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AP000705.1-201ENST00000454567 350 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 USP9YP10-201ENST00000454868 628 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 BX322784.1-201ENST00000455793 1077 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AC116353.3-201ENST00000511215 249 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 MRPS33P3-201ENST00000513456 322 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 RNU6-1129P-201ENST00000515964 104 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 OR7K1P-201ENST00000546439 926 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 AC128657.1-201ENST00000549459 145 ntBASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.1□□□□□ -1.91
CLIP2Q9UDT6 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms